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. 2020 Feb 6;11:754. doi: 10.1038/s41467-020-14570-z

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© The Author(s) 2020, corrected publication 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — a Ordination of the communities using principal coordinates analysis to investigate change in community composition from the start to the end of the selection experiment. Numbers and arrows indicate the communities. Note that we sequenced two replicates from all background communities for four different focal strain bags. b Histogram of the most common OTUs highlighting the most important taxa in the final communities. Rarer taxa are subsumed into the “other” category. ‘Start‘ shows the initial communities at month 0 and ‘End‘ the evolved communities after 5 months. Those ‘End‘ communities were used to compete the evolved and ancestral strains. Source data are provided as a Source Data file.