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. 2020 Feb 7;21:131. doi: 10.1186/s12864-020-6508-1

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© The Author(s). 2020

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — MDS plot showing reproducibility among two biological replicates of our RNA-seq samples. The MDS plot was generated by using the expected counts generated by RSEM to ordinate samples in multidimensional space based on differences in expression values. The close clustering of biological replicates indicates a high degree of consistency across all genes. The percentage of variance in the X axis indicating the difference of the two plant types is 82.5% while the percentage of variance in the Y axis indicating the difference of non-treated and salt-treated samples is 6.0%