Table 2 A table is shown reflecting all of the significantly enriched GO terms from the gene groups produced from either the Fuzzy C-means clustering or the Top 500 most highly expressed genes in each sample. For each GO term, supporting information is provided such as the Gene Group from which it was identified the Code name, False discovery rate and information about how many genes with this term were identified compared to the total number in the transcriptome

Gene Group	Code Name	False Discovery Rate	# of Genes in Group with Term	# of Genes in Transcriptome with Term	GO Term Annotation
Continual_increase_fuzzycluster	PF13909	0.000130095	23	189	C2H2-type zinc-finger domain
Continual_increase_fuzzycluster	GO:0003676	0.000187859	69	1115	nucleic acid binding, molecular_function
M1_fuzzycluster	GO:0006412	1.39345E-06	52	548	translation, biological_process
M1_fuzzycluster	PF02958	1.62758E-06	19	85	Ecdysteroid kinase
M1_fuzzycluster	PF00112	0.000255183	17	110	Papain family cysteine protease
M1_fuzzycluster	PF00504	0.000255183	11	43	Chlorophyll A-B binding protein
M1_fuzzycluster	GO:0008234	0.000504127	17	121	cysteine-type peptidase activity, molecular_function
M1_fuzzycluster	GO:0006414	0.000780785	11	56	translational elongation, biological_process
M1_Top 500	PF00112	1.58324E-11	19	110	Papain family cysteine protease
M1_Top 500	GO:0008234	2.43945E-11	19	121	cysteine-type peptidase activity, molecular_function
M1_Top 500	PF00135	1.63518E-08	15	100	Carboxylesterase family
M1_Top 500	PF02958	1.13244E-06	12	85	Ecdysteroid kinase
M1_Top 500	PF00067	4.40651E-06	14	146	Cytochrome P450
M1_Top 500	GO:0055114	0.000163275	37	1078	oxidation-reduction process, biological_process
M1_Top 500	GO:0006508	0.000818748	18	394	proteolysis, biological_process
M2_fuzzycluster	PF00112	5.48524E-05	11	110	Papain family cysteine protease
M2_fuzzycluster	GO:0008234	0.000114662	11	121	cysteine-type peptidase activity, molecular_function
M2_Top 500	GO:0055114	3.88423E-08	53	1078	oxidation-reduction process, biological_process
M2_Top 500	PF00112	2.93311E-07	15	110	Papain family cysteine protease
M2_Top 500	GO:0008234	7.96227E-07	15	121	cysteine-type peptidase activity, molecular_function
M2_Top 500	PF00067	9.31946E-07	16	146	Cytochrome P450
M3_Top500	GO:0055114	1.54695E-07	51	1078	oxidation-reduction process, biological_process
M3_Top500	PF00067	4.50598E-05	14	146	Cytochrome P450
M3_Top500	PF00135	4.50598E-05	12	100	Carboxylesterase family
M4_fuzzycluster	GO:0055085	1.64321E-13	137	572	transmembrane transport, biological_process
M4_fuzzycluster	GO:0016021	1.03943E-10	122	543	integral component of membrane, cellular_component
M4_fuzzycluster	PF12796	2.91941E-05	83	387	Ankyrin repeats (3 copies)
M4_fuzzycluster	GO:0008061	4.19023E-05	29	85	chitin binding, molecular_function
M4_fuzzycluster	GO:0016020	5.10354E-05	95	517	membrane, cellular_component
M4_fuzzycluster	PF00083	0.000120073	36	117	Sugar (and other) transporter
M4_fuzzycluster	GO:0005515	0.000164315	307	2221	protein binding, molecular_function
M4_fuzzycluster	GO:0006468	0.000464805	57	282	protein phosphorylation, biological_process