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. 2020 Feb 7;21:132. doi: 10.1186/s12864-020-6550-z

Table 1.

List of genes involved in Phototransduction pathway of Pde6c mutant zebrafish (p-value = 0.0014000; FDR = 0.0039000)

Ref mRNA Gene Symbol Gene Name logFC p-value
NM_001007160 pde6a phosphodiesterase 6A, cGMP-specific, rod, alpha −12.88482348 9.29E-08
NM_001017711 grk1b G protein-coupled receptor kinase 1 b −15.21450566 1.36E-13
NM_001030248 rcvrna recoverin a −14.7635283 1.67E-12
NM_001031841 grk7a G protein-coupled receptor kinase 7a −14.51580863 8.55E-12
NM_001034181 grk1a G protein-coupled receptor kinase 1 a −5.203467963 2.80E-06
NM_001327800 rgs9a regulator of G protein signaling 9a −5.215468297 1.45E-08
NM_131084 rho rhodopsin −6.296723464 8.77E-13
NM_131868 gnat1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 −7.218093348 2.15E-13
NM_131869 gnat2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 −4.074631105 4.60E-08
NM_199570 calm3b calmodulin 3b (phosphorylase kinase, delta) −14.42999547 1.49E-11
NM_199996 calm2a calmodulin 2a (phosphorylase kinase, delta) −13.04988312 3.41E-08
NM_213481 gnb1b guanine nucleotide binding protein (G protein), beta polypeptide 1b −13.12286971 2.17E-08