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. 2020 Jan 31;11:13. doi: 10.3389/fgene.2020.00013

Table 3.

Effects of the RFT1-Hd3a region on 17 components of amino acid content (AAC) detected in the TF6-15 population.

Trait Phenotype (mean±SE) a P A b R 2 (%) c
NILZS97 NILMY46
Asp 0.721±0.006 0.762±0.010 0.0007 0.020 39.8
Thr 0.308± 0.003 0.326±0.004 0.0009 0.009 37.6
Ser 0.427± 0.004 0.452±0.005 0.0005 0.013 38.8
Glu 1.543±0.008 1.626±0.015 0.0003 0.042 42.0
Gly 0.183± 0.001 0.193±0.001 0.0002 0.005 50.0
Ala 0.421±0.004 0.447±0.007 <0.0001 0.013 46.3
Cys 0.273±0.003 0.286±0.006 0.0034 0.006 28.9
Val 0.331±0.005 0.359±0.008 0.0033 0.014 26.3
Met 0.047±0.003 0.051±0.005 0.4121
Ile 0.202±0.004 0.221±0.005 0.0063 0.009 22.6
Leu 0.577±0.004 0.614±0.006 <0.0001 0.019 47.1
Tyr 0.165±0.002 0.177±0.004 0.0295 0.006 16.7
Phe 0.382±0.003 0.413±0.005 <0.0001 0.015 54.9
Lys 0.231±0.003 0.250±0.005 <0.0001 0.010 52.1
His 0.167± 0.002 0.180±0.003 <0.0001 0.007 51.3
Arg 0.499±0.003 0.544±0.007 <0.0001 0.023 61.2
Pro 0.204±0.011 0.224±0.005 0.0534
a

NILZS97 and NILMY46 are near isogenic lines carrying homozygous alleles from ZS97 and MY46, respectively.

b

Additive effect of replacing a ZS97 allele with a MY46 allele.

c

Proportion of phenotypic variance explained by the QTL effect. R2 = VG/VP ×100, in which VG is the variance between the two genotypic groups, and VP the phenotypic variance.