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. 2019 May 24;59(6):2830–2836. doi: 10.1021/acs.jcim.9b00298

Figure 4.

Figure 4

Solvation of the 4-hydroxyphenyl or phenyl groups of the ligands over the unbiased MD simulations, represented by the number of water oxygen atoms within 4 Å from the moieties’ heavy atoms. The plots illustrate the average solvation and its standard deviation as a function of the RMSD of the ligand to an upright, 5IU4-like conformation (see Figure 3). Conformations A and B show the displacement of water molecules in the hydrophobic ECV pocket of A1R by LUF5452.