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. 2020 Feb 7;6(6):eaay2669. doi: 10.1126/sciadv.aay2669

Fig. 3. The G2/M-phase CDK1-dependent phosphorylation promotes the DNA binding affinity of Rad51.

Fig. 3

(A) Results from the serial dilution assay used to assess MMS sensitivity of rad51Δ cells expressing Rad51 variants. Cells were spotted in 10-fold serial dilutions on SC medium in the absence or presence of 0.01% MMS. rad51-2A indicates rad51Δ cells expressing the Rad51 mutant with alanine substitutions at Ser125 and Ser375. rad51-2E indicates rad51Δ cells expressing the Rad51 mutant with glutamate substitutions at Ser125 and Ser375. (B) Homologous recombination efficiency test of rad51Δ cells expressing Rad51 variants. Genomic DNA was extracted every 1 hour after 2% galactose addition and analyzed by PCR. Arrowheads indicate the PCR products of the homologous recombination intermediates. Asterisks indicate the PCR products of the control region (ARG5,6). (C) Accumulated GFP-tagged Rad51 and Rad51-2A at the DNA damage sites. To make DSB, HO endonuclease was induced during incubation with 2% galactose for 3 hours. DIC, differential interference contrast. Scale bars, 4 μm. The percentages of cells with Rad51-GFP foci are shown on the right panel. Data are presented as the means ± SD of triplicate experiments. P values were determined by Student’s t test (***P < 0.005). (D) ChIP assay was used to assess the DNA binding affinity of Rad51 and Rad51-2A. HO endonuclease was induced during incubation with 2% galactose for 3 hours. Immunoprecipitated DNA with Rad51 variants was analyzed for the MAT locus by PCR (left panel) and by quantitative real-time PCR (right panel). CUP1 was used as a negative control. Data are presented as the means ± SD of triplicate experiments. P values were determined by a one-sample t test (***P < 0.005). ns, not significant. (E) Results from the EMSA used to assess the ssDNA binding affinity of Rad51 and Rad51-2A. EMSA was performed using a binding buffer that includes 35 mM tris-Cl (pH 7.5), 5 mM ATP, 5 mM MgCl2, 50 mM KCl, bovine serum albumin (100 μg/ml), and 1 mM dithiothreitol. (F) Results from the EMSA used to assess the DNA binding affinity of the G1- and the G2/M-phase Rad51. α-Factor (150 μM) and nocodazole (15 μg ml−1) were treated to synchronize cell cycle to the G1 and G2/M phases, respectively.