Table 2.
Virus | Segment | Sequencing depth (reads) | Average coverage (total nt./contig length) |
---|---|---|---|
Cacao | Large | 941,866 | 23,107 |
Medium | 239,818 | 9,789 | |
Small | 72,084 | 6,089 | |
Caimito | Large | 164,510 | 3,720 |
Medium | 89,167 | 2,963 | |
Small | 15,104 | 2,177 | |
Chilibre | Large | 119,283 | 3,205 |
Medium | 459,251 | 15,904 | |
Small | 82,185 | 11,899 | |
Frijoles | Large | 430,190 | 9,348 |
Medium | 269,486 | 8,304 | |
Small | 165,384 | 11,441 | |
Icoaraci | Large | 551,243 | 11,244 |
Medium | 257,597 | 8,380 | |
Small | 106,093 | 8,045 | |
Itaporanga | Large | 359,773 | 8,162 |
Medium | 210,617 | 6,941 | |
Small | 124,241 | 8,740 | |
Rio Grande | Large | 330,900 | 6,655 |
Medium | 390,455 | 11,280 | |
Small | 71,130 | 5,575 |