Table J.1.
Studies identified and their main characteristics
| Study ID | Citation | Species | Bacteria, matrix |
|---|---|---|---|
| 1 | Osterberg et al. (2016) | Pigs | E. coli, faeces |
| 2 | Gerzova et al. (2015) | Pigs | Faecal microbiota, faeces |
| 3 | Huijbers et al. (2015) | Broilers and humans working in farms | S. aureus and E. coli, broiler and human samples |
| 4 | Fraqueza et al. (2014) | Chickens | Campylobacter spp., caecal pools, carcasses |
| 5 | Cohen Stuart et al. (2012) | Chickens | E. coli, poultry products |
| 6 | Kola et al. (2012) | Chickens | E. coli producing ESBLs, meat |
| 7 | Garmo et al. (2010) | Dairy cows | S. aureus and coagulase‐negative staphylococci, milk |
| 8 | Miranda et al. (2008b)a | Pigs | E. coli, meat at the point of retail |
| 9 | Miranda et al. (2008a) | Poultry | E. coli, S. aureus, Listeria monocytogenes, meat at the point of retail |
| 10 | Schwaiger et al. (2010) | Laying hens | Salmonella spp., E. coli, Campylobacter spp., eggs, cloaca samples |
| 11 | da Miran et al. (2007)a | Chickens | Enterococcus spp., meat at the point of retail |
| 12 | Bennedsgaard et al. (2006) | Dairy cows | S. aureus, milk |
| 13 | Roesch et al. (2006) | Dairy cows | S. aureus, non‐aureus staphylococci, Streptococcus uberis, Str dysgalactiae, milk |
| 14 | Boutet et al. (2005)a | Dairy cows | Mastitis pathogens, milk |
| 15 | Heuer et al. (2001) | Broilers | Campylobacter spp., faeces |
| 16 | Kassem et al. (2016) | Chickens | Campylobacter spp., faeces |
| 17 | Lee et al. (2013) | Poultry | Salmonella spp., eggs |
| 18 | Zwonitzer et al. (2016) | Pigs | E. coli, manure |
| 19 | Tamang et al. (2015) | Pigs | Salmonella spp., faeces |
| 20 | Cicconi‐Hogan et al. (2014) | Dairy cows | S. aureus, coagulase‐negative staphylococci (CNS), milk |
| 21 | Mollenkopf et al. (2014) | Chickens | Salmonella spp., E. coli, Campylobacter spp.,, chicken products |
| 22 | Sapkota et al. (2014) | Chickens | Salmonella spp., litter/water/food samples |
| 23 | Sapkota et al. (2011) | Chickens | Enterococcus spp. |
| 24 | Millman et al. (2013) | Poultry | E. coli, poultry products |
| 25 | Park et al. (2012) | Dairy cows | Coagulase‐negative staphylococci, milk |
| 26 | Lestari et al. (2009) | Chickens | Salmonella spp., carcases at the point of retail |
| 27 | Nulsen et al. (2008)a | Pigs | E. coli, Enterococcus spp., faecal samples |
| 28 | Bombyk et al. (2008) | Dairy cows | Staphylococcus spp., milk |
| 29 | Bunner et al. (2007)a | Pigs | E. coli, faecal samples |
| 30 | Cho et al. (2007) | Dairy cows | E. coli, faecal samples, manure |
| 31 | Pol and Ruegg (2007a)a | Dairy cows | Gram‐positive mastitis pathogens |
| 32 | Siemon et al. (2007)a | Poultry | Salmonella spp., faecal droppings |
| 33 | Walk et al. (2007) | Dairy cows | E. coli, faeces |
| 34 | Gebreyes et al. (2006)a | Pigs | Salmonella spp., faecal samples and carcass swabs |
| 35 | Halbert et al. (2006) | Dairy cows | Campylobacter spp., faeces, environmental samples |
| 36 | Luangtongkum et al. (2006) | Chickens and turkeys | Campylobacter spp., intestinal tracts |
| 37 | Ray et al. (2006) | Dairy cows | Salmonella spp., environmental and faecal samples |
| 38 | Cui et al. (2005) | Chickens | Campylobacter and Salmonella spp., carcases at the point of retail |
| 39 | Price et al. (2005)a | Chickens | Campylobacter spp., poultry products |
| 40 | Sato et al. (2005) | Dairy cows | E. coli, faeces |
| 41 | Sato et al. (2004) | Dairy cows | Campylobacter spp., faeces |
| 42 | Tikofsky et al. (2003) | Dairy cows | S. aureus, milk |
a
Studies retrieved from one of the three systematic reviews considered (see Section 4.2.3.10).