Table 5. Myf6 probes showing differences in methylation between HCL and HCLv.
| Probe | Place | P-value | Stepped-up p-value | t-value | Strand | UCSC RefGene Group | Relation to UCSC CpG Island |
|---|---|---|---|---|---|---|---|
| cg05981335 | 280 | 1.43E-09 | 2.44E-06 | -7.142 | F | Body | Island |
| cg05860723 | 295 | 1.82E-09 | 2.93E-06 | -7.082 | R | Body | Island |
| cg25176746 | 663 | 7.42E-08 | 5.34E-05 | -6.131 | F | 3'UTR | S_Shore |
| cg22344727 | 741 | 1.17E-07 | 7.52E-05 | -6.013 | R | Body | Island |
| cg08352786 | 828 | 1.75E-07 | 0.000101 | 5.908 | R | TSS1500 | N_Shore |
| cg17594351 | 2890 | 1.58E-05 | 0.002613 | -4.697 | F | TSS200 | N_Shore |
| cg00756032 | 5134 | 0.0001 | 0.009465 | -4.163 | R | Body | Island |
| cg20171297 | 6967 | 0.00025 | 0.017133 | -3.894 | R | 1stExon;5'UTR | N_Shore |
| cg15166296 | 18410 | 0.00308 | 0.079676 | -3.085 | F | TSS1500 | N_Shore |
| cg26711820 | 20008 | 0.00371 | 0.088353 | -3.02 | F | 1stExon | N_Shore |
| cg25178519 | 36755 | 0.0141 | 0.182887 | 2.529 | R | TSS1500 | N_Shore |