Table 3. Crystallographic statistics for the AcAChBP–4 complex.
Values in parentheses are for the highest resolution shell.
| Data statistics | |
| Unit-cell parameters (Å, °) | a = 209.5, b = 132.9, c = 131.1, α = 90.0, β = 102.5, γ = 90.0 |
| Space group | C2 |
| Wavelength (Å) | 0.976 |
| Subunits per asymmetric unit | 10 |
| Resolution range (Å) | 127.97–1.72 (1.75–1.72) |
| Total No. of reflections | 1225936 (25553) |
| Unique reflections | 353432 (12162) |
| Multiplicity | 3.5 (2.1) |
| R merge † | 0.07 (0.82) |
| R p.i.m. | 0.064 (0.794) |
| Wilson B factor (Å2) | 25.07 |
| Completeness (%) | 95.5 (66.6)‡ |
| 〈I/σ(I)〉 | 7.6 (0.6)§ |
| CC1/2 ¶ | 0.993 (0.435) |
| Refinement | |
| Resolution range (Å) | 90.12–1.72 |
| R work/R free †† (%) | 16.2/19.2 |
| No. of reflections for R work/R free | 335977/17388 |
| No. of protein residues | 2058 |
| No. of NAG molecules | 10 |
| No. of molecules of 4 | 10 |
| No. of phosphate molecules | 10 |
| No. of glycerol molecules | 40 |
| No. of water molecules | 2899 |
| No. of chloride ions | 10 |
| No. of potassium ions | 10 |
| R.m.s.d.s | |
| Bond lengths (Å) | 0.013 |
| Angles (°) | 1.84 |
| Ramachandran plot | |
| Residues in favored regions (%) | 98.77 |
| Residues in allowed regions (%) | 1.23 |
| Mean B factors (Å2) | |
| Protein atoms (subunit A–J) | 30.1/29.2/29.7/28.4/30.6/29.8/31.5/31.8/33.4/34.5 |
| NAG molecules (subunit A–J) | 93.7/90.2/108.6/87.6/99.5/97.1/104.2/103.6/100.2/92.6 |
| Water molecules | 46.0 |
| Ligand 4 (subunit A–J) | 28.1/27.9/23.5/22.2/27.9/29.9/23.7/32.4/33.3/31.5 |
| Phosphate ions (subunit A–J) | 58.1/54.2/57.4/63.8/49.2/49.5/56.4/71.9/52.6/58.0 |
| Glycerol molecules | 59.9 |
| Chloride ions (subunit A–J) | 33.7/34.6/32.0/32.9/33.5/34.0/37.9/35.2/35.9/37.8 |
| Potassium ions (subunit A–J) | 37.3/37.4/38.6/40.0/39.5/40.5/41.3/40.5/43.2/44.2 |
| PDB code | 6t9r |
R
merge =
, where Ii(hkl) is the intensity of the ith measurement of reflection hkl and 〈I(hkl)〉 is the mean value of Ii(hkl) for all i measurements.
Completeness was <70% in the highest resolution shell owing to the use of a square detector for data collection.
〈I/σ(I)〉 = 2.0 at 1.90 Å resolution.
Pearson correlation coefficient.
R
work =
, where F
obs is the observed structure-factor amplitude and F
calc is the structure-factor amplitude calculated from the model. R
free is the same as R
work except that it was calculated using a subset (5%) of data that were excluded from refinement calculations.