Figure 1. CNApp workflow.

The diagram depicts the overall processes performed by CNApp and indicates the output for each section.

Figure 1—figure supplement 1. Spearman’s rank correlations between CNA scores and fractions of altered genome.

(A) Broad CNA Score (BCS) and fractions of altered genome affected by broad CNA events (whole chromosome and arm-level alterations) in each respective sample (Figure 1—figure supplment 1—source data 1). (B) Focal CNA Score (FCS) and the fraction of altered genome by focal CNA events in each respective sample (Figure 1—figure supplment 1—source data 1). (C) Global CNA Score (GCS) and the overall fraction of altered genome in each respective sample (Figure 1—figure supplment 1—source data 1). (TIFF 572 KB).