TABLE 10.
Enriched and depleted gene ontology terms associated with Al exposure in the absence of the caryopses (FOA).
| Enriched | ||
| Term Type | Description | DEG |
| Biological process | Biological process | 860 |
| Biological process | Metabolic process | 686 |
| Molecular function | Catalytic activity | 658 |
| Biological process | Single-organism process | 530 |
| Biological process | Single-organism metabolic process | 362 |
| Molecular function | Oxidoreductase activity | 221 |
| Biological process | Oxidation-reduction process | 218 |
| Biological process | Organonitrogen compound metabolic process | 152 |
| Biological process | Small molecule metabolic process | 128 |
| Biological process | Single-organism biosynthetic process | 121 |
| Biological process | Organonitrogen compound biosynthetic process | 102 |
| Biological process | Carboxylic acid metabolic process | 86 |
| Biological process | Oxoacid metabolic process | 86 |
| Biological process | Organic acid metabolic process | 86 |
| Biological process | Cellular amino acid metabolic process | 58 |
| Molecular function | Lyase activity | 56 |
| Molecular function | Transferase activity, transferring acyl groups | 51 |
| Biological process | Small molecule biosynthetic process | 47 |
| Biological process | Alpha-amino acid metabolic process | 37 |
| Biological process | Organic acid biosynthetic process | 35 |
| Biological process | Carboxylic acid biosynthetic process | 35 |
| Molecular function | Active transmembrane transporter activity | 26 |
| Molecular function | Hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 25 |
| Molecular function | Primary active transmembrane transporter activity | 23 |
| Molecular function | P-P-bond-hydrolysis-driven transmembrane transporter activity | 23 |
| Molecular function | Pyridoxal phosphate binding | 23 |
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | 22 |
| Molecular function | ATPase activity, coupled to movement of substances | 22 |
| Molecular function | ATPase activity, coupled | 22 |
| Molecular function | Carbon-carbon lyase activity | 21 |
| Molecular function | Carboxy-lyase activity | 14 |
| Biological process | Glutamine family amino acid metabolic process | 12 |
| Biological process | Energy coupled proton transport, down electrochemical gradient | 9 |
| Biological process | ATP synthesis coupled proton transport | 9 |
| Molecular function | Carboxylic acid binding | 7 |
| Molecular function | Organic acid binding | 7 |
| Molecular function | Transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 6 |
| Mmolecular function | Amino acid binding | 6 |
| Biological process | Pyridine-containing compound biosynthetic process | 6 |
| Molecular function | Proton-transporting ATP synthase activity, rotational mechanism | 5 |
| Molecular function | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | 5 |
| Molecular function | Cation-transporting ATPase activity | 5 |
| Molecular function | ATPase activity, coupled to transmembrane movement of ions | 5 |
| Biological process | Organic hydroxy compound biosynthetic process | 5 |
| Depleted | ||
| Term Type | Description | DEG |
| Biological process | Bbiological regulation | 196 |
| Molecular function | Cation binding | 191 |
| Biological process | Regulation of cellular process | 190 |
| Biological process | Regulation of biological process | 190 |
| Molecular function | Metal ion binding | 187 |
| Molecular function | Transition metal ion binding | 161 |
| Molecular function | Zinc ion binding | 122 |
| Molecular function | Nucleic acid binding transcription factor activity | 87 |
| Molecular function | Transcription factor activity, sequence-specific DNA binding | 87 |
| Molecular function | RNA polymerase II transcription factor activity, sequence-specific DNA binding | 60 |
| Molecular function | Heme binding | 39 |
| Mmolecular function | Tetrapyrrole binding | 39 |
| Molecular function | Iron ion binding | 36 |
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | 13 |
| Biological process | Siroheme biosynthetic process | 12 |
| Molecular function | Precorrin-2 dehydrogenase activity | 12 |
| Biological process | Siroheme metabolic process | 12 |
| Molecular function | Ooxidoreductase activity, acting on peroxide as acceptor | 10 |
| Molecular function | Peroxidase activity | 8 |
DEG is the number of differentially expressed genes induced by Al in the absence of the caryopsis. The darker the DEG cell, the higher the number of DEGs.