TABLE 2.
Gene symbol | Ensembl ID | Gene name | Forward primer; sequence | Forward primer position |
Atp5f1a | ENSRNOG00000017032 | ATP synthase F1 subunit alpha | TGACCGAGCTGCTAAAGCAA | 1,449–1,468 |
Cox4i1 | ENSRNOG00000017817 | Cytochrome c oxidase subunit 4i1 | CCATGTTCTTCATCGGCTTCA | 417–437 |
Cycs | LOC100363502-201 | Cytochrome c, somatic-like | GGCTGCTGGATTCTCTTACACA | 204–225 |
Gpx4 | ENSRNOG00000013604 | Glutathione peroxidase 4 | AGGCAGGAGCCAGGAAGTAATC | 496–517 |
Ppargc1a | ENSRNOG00000004473 | PPARG coactivator 1 alpha | AAGGTCCCCAGGCAGTAGATC | 1,906–1,926 |
Ppib | ENSRNOG00000016781 | Peptidylprolyl isomerase B | GGCTCCCAGTTCTTCATAACTACAG | 561–585 |
Sod2 | ENSRNOG00000019048 | Superoxide dismutase 2 | TGCCGCCTGCTCTAATCAG | 566–584 |
Gene symbol | Reverse primer; sequence | Reverse primer position | Exon–exon boundary | AE |
Atp5f1a | TGACAGCCACCTGTTCTTCAAT | 1,511–1,490 | Yes | 1.96 |
Cox4i1 | GGGCCATACACGTAGCTCTTCT | 480–459 | Yes | 1.91 |
Cycs | TTTCCAAATACTCCATCAGGGTATC | 286–262 | Yes | 1.88 |
Gpx4 | CAGATCTTGCTGTACATGTCAAACC | 578–554 | Yes | 1.90 |
Ppargc1a | GGTGTCTGTAGTGGCTTGATTCAT | 1,973–1,950 | Yes | 1.89 |
Ppib | ACCACATCCATGCCTTCCA | 652–634 | Yes | 1.95 |
Sod2 | CGTGCTCCCACACATCAATC | 645–626 | Yes | 1.91 |
Gene sequences were taken from the Ensembl genome browser, and the positions corresponding to primer sequences (in 5′–3′ direction) are listed. Primer pairs were designed to span across an exon–exon boundary. The achieved amplification rate over three cycles in the geometric phase with each primer set is listed.