Table 1.
Summary of Ton-related structures.
| PDB ID | Method; Resolution | Species | ExbB | ExbD | Other | Detergent(s) | Reference |
|---|---|---|---|---|---|---|---|
| 6TYI | CryoEM; 3.3 Å | E. coli | 5 | 2 | MSP1E3D1 nanodisc | Celia et al., Nat Comm Bio 2019 [40] | |
| 5ZFP | X-ray; 2.84 Å | E. coli | 6 | 0 | 0.5% C8E4 or 0.07% C10E5 | Maki-Yonekura et al., ELife 2018 [38] | |
| 5ZFU | CryoEM; 6.7 Å | E. coli | 6 | 3 | 0.002% LMNG | Maki-Yonekura et al., ELife 2018 [38] | |
| 5ZFV | CryoEM; 7.1 Å | E. coli | 5 | 1 | 0.002% LMNG | Maki-Yonekura et al., ELife 2018 [38] | |
| 5SV0 | X-ray; 2.6 Å | E. coli | 5 | 1 (NTD) | 0.08% C10E5 | Celia et al., Nature 2016 [7] | |
| 5SV1 | X-ray; 3.5 Å | E. coli | 5 | 1 (NTD) | 0.08% C10E5 | Celia et al., Nature 2016 [7] | |
| 2PFU | NMR | E. coli | 1 (CTD) | Garcia-Herrero et al., 2007 [36] | |||
| 2GRX | X-ray; 3.3 Å | E. coli | 1 (TonB CTD); 1 (FhuA) | Pawelek et al., 2006 [20] | |||
| 2GSK | X-ray; 2.1 Å | E. coli | 1 (TonB CTD); 1 (BtuB) | Shultis et al., 2006 [22] | |||
| 1IHR | X-ray; 1.55 Å | E. coli | 2 (TonB CTD) | Chang et al., JBC 2001 [30] | |||
| 1QXX | X-ray; 2.7 Å | E. coli | 2 (TonB CTD) | Koedding et al., JBC 2004 [33] | |||
| 1XX3 | NMR | E. coli | 1 (TonB CTD) | Peacock et al., JMB 2005 [35] | |||
| 1U07 | X-ray; 1.13 Å | E. coli | 1 (TonB CTD) | Koedding et al., JBC 2005 [32] | |||
| 6FIP | NMR | P. aeruginosa | 1 (TonB CTD) | Oeemig et al., PeerJ 2018 [34] | |||
| 5LW8 | NMR | H. pylori | 1 (TonB CTD) | Ciragan et al., 2016 [31] | |||
| 2K9K | NMR | V. anguillarum | 1 (TonB CTD) | Lopez et al., Biochem J 2009 [41] | |||
| 2JWK | NMR | H. influenzae | 1 (TolR CTD) | - | Parsons et al., 2008 [42] | ||
| 2JWL | NMR/SAXS | H. influenzae | 1 (TolR CTD) | Parsons et al., 2008 [42] | |||
| 5BY4 | X-ray; 1.7 Å | E. coli | 1 (TolR CTD) | Wojdyla et al., 2015 [43] | |||
| 1S62 | NMR | E. coli | 1 (TolA CTD) | Deprez et al., JMB 2005 [44] | |||
| 1LR0 | X-ray; 1.91 Å | P. aeruginosa | 1 (TolA CTD) | Witty et al., EMBO J 2002 [45] | |||
| 2X9A | X-ray; 2.47 Å | E. coli | 1 (TolA CTD) | Lorenz et al., JMB 2011 [46] | |||
| 1TOL | X-ray; 1.85 Å | E. coli | 1 (TolA CTD) | Lubkowski et al., Structure Fold Des 1999 [47] | |||
| 3QDR | X-ray; 2.65 Å | E. coli | 1 (TolA CTD) | Li et al., JBC 2012 [48] | |||
| 3QDP | X-ray; 2.15 Å | E. coli | 1 (TolA CTD) | Li et al., JBC 2012 [48] | |||
| 2ZOV | X-ray; 2.0 Å | S. typhimurium | 2 (MotB) | Kojima et al., Mol Micro 2009 [49] | |||
| 2ZVY | X-ray; 1.75 Å | S. typhimurium | 2 (MotB) | Kojima et al., Mol Micro 2009 [49] | |||
| 2ZVZ | X-ray; 2.4 Å | S. typhimurium | 2 (MotB) | Kojima et al., Mol Micro 2009 [49] | |||
| 5Y3Z | X-ray; 2.0 Å | S. typhimurium | 2 (MotB) | Kojima et al., Mol Micro 2018 [50] | |||
| 5Y40 | X-ray; 2.8 Å | S. typhimurium | 2 (MotB) | Kojima et al., Mol Micro 2018 [50] | |||
| 3KHN | X-ray; 2.03 Å | D. vulgaris | 2 (MotB) | No citation | |||
| 3S02 | X-ray; 2.5 Å | H. pylori | 2 (MotB) | O’Neill et al., Acta Crys D 2011 [51] | |||
| 3S0H | X-ray; 2.1 Å | H. pylori | 2 (MotB) | O’Neill et al., Acta Crys D 2011 [51] | |||
| 3S0W | X-ray; 2.5 Å | H. pylori | 2 (MotB) | O’Neill et al., Acta Crys D 2011 [51] | |||
| 3S0Y | X-ray; 1.8 Å | H. pylori | 2 (MotB) | O’Neill et al., Acta Crys D 2011 [51] | |||
| 3S03 | X-ray; 2.5 Å | H. pylori | 2 (MotB) | O’Neill et al., Acta Crys D 2011 [51] | |||
| 3S06 | X-ray; 1.8 Å | H. pylori | 2 (MotB) | O’Neill et al., Acta Crys D 2011 [51] | |||
| 3CYP | X-ray; 1.6 Å | H. pylori | 2 (MotB) | Roujeinikova, PNAS 2008 [52] | |||
| 3CYQ | X-ray; 2.3 Å | H. pylori | 2 (MotB) | Roujeinikova, PNAS 2008 [52] | |||
| 3IMP | X-ray; 2.5 Å | H. pylori | 2 (MotB) | Reboul et al., Plos one 2011 [53] |