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. 2020 Feb 11;21:53. doi: 10.1186/s12859-020-3393-1

Table 6.

Case study of the label sequence prediction performed by DTranNER and Unary-CRF

Diseases/Chemicals
Case 1 Unary-CRF to enable diagnosis of ureteric stones or obstruction in patients with HIV infection who receive indinavir theraphy
DTranNER to enable diagnosis of ureteric stones or obstruction in patients with HIV infection who receive indinavir theraphy
Case 2 Unary-CRF The present study was designed to investigate whether nociceptin / orphanin FQ and nocistatin could modulate
impairment of learning and memory induced by scopolamine
DTranNER The present study was designed to investigate whether nociceptin / orphanin FQ and nocistatin could modulate
impairment of learning and memory induced by scopolamine
Case 3 Unary-CRF We report the case of a female patient with rheumatoid arthritis who developed acute cytolytic hepatitis due to meloxicam
DTranNER We report the case of a female patient with rheumatoid arthritis who developed acute cytolytic hepatitis due to meloxicam
Case 4 Unary-CRF Reduced nicotinamide adenine dinucleotide phosphate - diaphorase (NADPH - d) histochemistry was also employed to
DTranNER Reduced nicotinamide adenine dinucleotide phosphate - diaphorase (NADPH - d) histochemistry was also employed to
Genes/Proteins
Case 5 Unary-CRF The MIC90 of ABK against coagulase type IV strains was rather high, 12.5 micrograms/ml
DTranNER The MIC90 of ABK against coagulase type IV strains was rather high, 12.5 micrograms/ml
Case 6 Unary-CRF subtle differences between individual subunits that lead to species - specific properties of RNA polymerase I transcription
DTranNER subtle differences between individual subunits that lead to species - specific properties of RNA polymerase I transcription
Case 7 Unary-CRF The S. typhimurium aspartyl / asparaginyl beta - hydroxylase homologue (designated lpxO) was cloned into
DTranNER The S. typhimurium aspartyl / asparaginyl beta - hydroxylase homologue (designated lpxO) was cloned into

Note: Unary-CRF is the purpose-built model excluding Pairwise-Network from DTranNER. The named entities inferred by each model are underlined in sentences