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. 2020 Feb 12;21:34. doi: 10.1186/s13059-020-1947-1

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© The Author(s). 2020

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 7 — NMDS of chicken caecal samples clustered by abundance of MAG CAZymes (Bray-Curtis dissimilarity). a Ross 308 birds clustered significantly by diet (PERMANOVA: P = 0.021). b Ranger Classic birds did not cluster significantly by diet (PERMANOVA: P = 0.095). c Birds on a vegetable diet did not cluster significantly by line (PERMANOVA: P = 0.061). d Birds on a fish meal diet clustered significantly by line (PERMANOVA: P = 0.0065)