TABLE 1.
Dataset description of sequences of human and animal origin detected worldwide and used to build the tree.
EU |
Non-EU |
Total | ||||||
Subtype | Hu | Sw | Wb | Hu | Mon | Sw | Wb | |
3* | 1 | 1 | 1 | 2 | 5 | |||
3a | 2 | 2 | 3 | 1 | 8 | |||
3b | 1 | 1 | 1 | 3 | ||||
3c | 45 | 8 | 1 | 1 | 55 | |||
3e | 6 | 3 | 1 | 2 | 1 | 4 | 17 | |
3f | 32 | 12 | 8 | 2 | 54 | |||
3g | 1 | 1 | ||||||
3h | 1 | 1 | ||||||
3i | 1 | 1 | ||||||
3j | 1 | 1 | ||||||
3k | 2 | 1 | 3 | |||||
3l | 1 | 1 | 2 | |||||
Total | 88 | 27 | 4 | 17 | 1 | 13 | 1 | 151** |
*, Not assignable to any subtype; **, 15 reference strains; Hu, humans; Sw, pig; Wb, wild boar; Mon, monkey; EU, European strains; Non-EU, non-European strains.