Table 1. Expression levels of CEACAM5, KLK6, SLC35D3, MUC2, and POSTN mRNAs in primary CRC tumors, normal colon, normal colon epithelial cells, CC cell lines, peripheral blood mononuclear cells, immune cell lines, a fibroblast cell line, CC liver metastases and normal liver.
mRNA copies / 18S rRNA unit | |||||||
---|---|---|---|---|---|---|---|
SOURCE | n° | CEACAM5 | KLK6 | SLC35D3 | MUC2 | POSTN | |
Primary CRC | 57 | 176* | 2.9 | 0.1 | 1.1 | 9.7 | |
tumors | (112–281)** | (0.9–8.5) | (0.04–0.4) | (0.3–4.2) | (4.6–22.2) | ||
CC cell | LS174T | 1 | 328# | 79 | 0## | 4.3 | 0 |
lines | HT29 | 1 | 32 | 256 | 0.02 | 0.01 | 0 |
T84 | 1 | 33 | 316 | 0.7 | 0.5 | 0 | |
HCT8 | 1 | 32 | 32 | 0.07 | 0.02 | 0 | |
CaCo2 | 1 | 3 | 0.4 | 0.09 | 0.04 | 0.0009 | |
Normal | Tissue | 5 | 222* | 0 | 0.02 | 9 | 5.9 |
colon | iECs | 5 | 300* | 0 | 0.0009 | 32 | 0.2 |
PBMCs | Fresh | 1 | 0 | 0 | 0.06 | 0 | 0 |
Act. | 1 | 0 | 0 | 0 | 0 | 0 | |
Immune cell lines | |||||||
T cell | Jurkat | 1 | 0 | 0 | 0 | 0 | 0.009 |
B cell | CNB6 + KR4 | 1 | 0 | 0 | 0 | 0 | 0 |
Plasma cell | U266 | 1 | 0 | 0 | 0 | 0 | 0.005 |
Monocyte | U937 | 1 | 0.005 | 0 | 0 | 0 | 0 |
Granulocyte | HL60 | 1 | 0 | 0 | 0 | 0 | 0 |
Other cell lines | |||||||
Erythroid | K562 | 1 | 0 | 0 | 0.09 | 0 | 0.001 |
Fibroblasts | FSU | 1 | 0.0002 | 0 | 0 | 0.004 | 5.5 |
Liver tissue | |||||||
Metastasis | 2 | 78 | 2 | 0.07 | 0.003 | 22.6 | |
Normal | 2 | 0.01 | 0 | 0 | 0.00004 | 2.3 |
° n = number of samples.
* Median of indicated number of samples.
** Interquartile range from the 25th to the 75th percentile.
# Cell lines and PBMCs: mean of 3 independent determinations.
## 0, < 0.00001 mRNA copies/18S rRNA unit.
iECs, isolated epithelial cells; PBMCs, peripheral blood mononuclear cells. The T-stages of the 57 primary tumors were: T2, 11; T3, 39; T4, 7.