Table 7.
Detection of mobile genetic elements and the presence of staphylococcal enterotoxins genes and percentage of coverage to the reference sequences.
| Strain | SaPI1 1 | SaPI3 2 | SaPI3 3 | SaPI3 4 | SaPI3 5 | SaPI (fhuD) 6 | SaPIbov 7 | Prophage (Gene SE) | Plasmid pLUH02 8 | Plasmid pSK67 9 |
|---|---|---|---|---|---|---|---|---|---|---|
| ProNaCC1 | n.d. | 100% | 100% | n.d. | n.d. | n.d. | n.d. | n.d. | 98.11% (sed, selj ser) | n.d. |
| ProNaCC2 | 1.46% | 100% | n.d. | 48.07% | 100% | n.d. | n.d. | ФN315, ФSa119 (see) | n.d. | n.d. |
| ProNaCC4 | n.d. | n.d. | n.d. | n.d. | 100% | 0.40% | 25.11% | ФN315, ФBU01 (sea) | n.d. | n.d. |
| ProNaCC5 | n.d. | 100% | n.d. | n.d. | n.d. | 23.98% | 0.44% | n.d. | n.d. | n.d. |
| ProNaCC6 | n.d. | 100% | 100% | n.d. | n.d. | n.d. | 0.44% | n.d. | n.d. | n.d. |
| ProNaCC7 | n.d. | 100% | 100% | n.d. | n.d. | n.d. | n.d. | ФN315, ФSa119, ФNM3, ФBU01 (sea) | n.d. | 85.14% (sed, selj ser) |
1 Reference sequences were obtained from GenBank. Accession number U93688.2; 2 CP000046.1, region 1,922,358–1,922,544; 3 CP000046.1, region 2,074,546–2,075,382; 4 CP000046.1, region 903,332–906,333; 5 CP000046.1, region 397,869–398,153; 6 AB983199.1; 7 AF217235.1; 8 NZ_LJBK01000031.1; 9 GQ900447.1; n.d.: not detected.