Table 3.
Mark | Tissue | Software | Combined Peak Number | Percent Genome Covered | AH1 Peak Number | AH2 Peak Number |
---|---|---|---|---|---|---|
H3K4me1 | Adipose | MACS2 | 107,318 | 5.1 | 130,242 | 157,497 |
Brain | MACS2 | 95,918 | 3.1 | 143,328 | 65,327 | |
Heart | MACS2 | 121,663 | 4.9 | 137,385 | 155,881 | |
Lamina | MACS2 | 114,708 | 4.2 | 137,575 | 124,150 | |
Liver | MACS2 | 116,760 | 3.6 | 97,863 | 135,122 | |
Lung | MACS2 | 92,972 | 2.9 | 90,687 | 109,001 | |
Muscle | MACS2 | 95,816 | 3.7 | 137,322 | 100,999 | |
Ovary | MACS2 | 102,986 | 4.3 | 166,303 | 133,209 | |
H3K4me3 | Adipose | MACS2 | 26,905 | 1.7 | 26,286 | 29,121 |
Brain | MACS2 | 27,101 | 1.6 | 25,473 | 28,028 | |
Heart | MACS2 | 26,475 | 1.4 | 24,101 | 27,985 | |
Lamina | MACS2 | 29,380 | 1.6 | 29,023 | 19,742 | |
Liver | MACS2 | 28,498 | 1.5 | 28,204 | 28,222 | |
Lung | MACS2 | 28,546 | 1.6 | 30,048 | 27,779 | |
Muscle | MACS2 | 28,110 | 1.6 | 30,428 | 25,123 | |
Ovary | MACS2 | 28,378 | 1.7 | 30,522 | 29,192 | |
H3K27ac | Adipose | MACS2 | 79,620 | 3.3 | 75,823 | 99,249 |
Brain | MACS2 | 78,823 | 3.2 | 89,445 | 73,795 | |
Heart | MACS2 | 68,728 | 2.9 | 71,462 | 7192 | |
Lamina | MACS2 | 82,394 | 2.9 | 91,345 | 78,953 | |
Liver | MACS2 | 87,589 | 3.1 | 84,814 | 96,238 | |
Lung | MACS2 | 69,054 | 2.9 | 69,621 | 75,299 | |
Muscle | MACS2 | 76,495 | 2.9 | 78,047 | 86,524 | |
Ovary | MACS2 | 64,318 | 3.3 | 94,817 | 82,318 | |
H3K27me3 | Adipose | MACS2 | 25,183 | 0.6 | 8948 | 29,906 |
Brain | MACS2 | 24,243 | 0.6 | 16,055 | 23,411 | |
Heart | MACS2 | 68,113 | 1.8 | 31,455 | 88,818 | |
Lamina | MACS2 | 37,366 | 0.8 | 31,839 | 28,508 | |
Liver | MACS2 | 63,874 | 1.3 | 93,423 | 23,888 | |
Lung | MACS2 | 30,191 | 0.7 | 32,385 | 18,124 | |
Muscle | MACS2 | 42,610 | 0.9 | 39,076 | 29,579 | |
Ovary | MACS2 | 40,825 | 1.2 | 43,036 | 33,220 | |
H3K27me3 | Adipose | SICER | 8167 | 4.9 | 13,540 | 14,571 |
Brain | SICER | 7860 | 3.4 | 11,386 | 13,603 | |
Heart | SICER | 9032 | 3.3 | 12,192 | 18,903 | |
Lamina | SICER | 7072 | 3.8 | 11,933 | 11,694 | |
Liver | SICER | 11,430 | 3.7 | 22,270 | 16,099 | |
Lung | SICER | 7863 | 2.6 | 12,668 | 11,715 | |
Muscle | SICER | 8437 | 4.6 | 17,073 | 10,987 | |
Ovary | SICER | 7083 | 3.0 | 14,731 | 11,124 |