Table 6.
Annotation of non-coding RNA genes in the A. altilis and A. heterophyllus genomes.
| Species | Type | Copy (w) | Average Length (bp) | Total Length (bp) | % of Genome |
|---|---|---|---|---|---|
| A. altilis | miRNA | 159 | 126.7 | 20,145 | 0.002418 |
| tRNA | 713 | 75.3 | 53,705 | 0.006447 | |
| rRNA | 466 | 183.2 | 85,353 | 0.010246 | |
| 18S | 76 | 551.4 | 41,907 | 0.005031 | |
| 28S | 98 | 125.5 | 12,296 | 0.001476 | |
| 5.8S | 32 | 135.6 | 4338 | 0.000521 | |
| 5S | 260 | 103.1 | 26,812 | 0.003219 | |
| snRNA | 1554 | 105.4 | 163,744 | 0.019656 | |
| CD-box | 1410 | 102.6 | 144,676 | 0.017367 | |
| HACA-box | 52 | 130.1 | 6765 | 0.000812 | |
| splicing | 92 | 133.7 | 12,303 | 0.001477 | |
| A. heterophyllus | miRNA | 168 | 126.3 | 21,227 | 0.002162 |
| tRNA | 689 | 75.2 | 51,813 | 0.005276 | |
| rRNA | 2706 | 268.2 | 725,709 | 0.073900 | |
| 18S | 654 | 737.5 | 482,306 | 0.049114 | |
| 28S | 920 | 123.6 | 113,667 | 0.011575 | |
| 5.8S | 242 | 151.6 | 36,699 | 0.003737 | |
| 5S | 890 | 104.5 | 93,037 | 0.009474 | |
| snRNA | 1005 | 108.2 | 108,724 | 0.011071 | |
| CD-box | 814 | 102.5 | 83,426 | 0.008495 | |
| HACA-box | 68 | 127.4 | 8665 | 0.000882 | |
| splicing | 123 | 135.2 | 16,633 | 0.001694 |