Table 7.
Up-regulated genes with known functions in Vd-X, Vd-Z, Vd-H and Vd-W at 6 h or 12 h
| Code | Gene ID | Enzyme name | FPKM value | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CK | VdX6 | VdX12 | VdZ6 | VdZ12 | VdH6 | VdH12 | VdW6 | VdW12 | |||
| 1 | VDAG_01200 | Multidrug resistance protein | 2.574203 | 3.176818 | 8.456135 | 10.58305 | 4.440765 | 8.923448 | 3.200822 | 3.971342 | 5.1336 |
| 2 | VDAG_02063 | L-amino-acid oxidase | 0.635877 | 0.5626 | 1.614603 | 1.483211 | 1.348462 | 1.682819 | 1.940567 | 0.826722 | 2.25874 |
| 3 | VDAG_02178 | Quinate permease | 0.058306 | 0.627263 | 0.485426 | 0.606461 | 1.024123 | 0.628178 | 0.873477 | 0.321581 | 0.459276 |
| 4 | VDAG_02520 | Response regulator receiver domain-containing protein | 11.43198 | 30.89575 | 40.29134 | 13.93595 | 49.39211 | 43.4858 | 14.60711 | 33.75135 | 13.91367 |
| 5 | VDAG_02528 | RNA-dependent RNA polymerase | 2.550404 | 6.828783 | 5.918211 | 5.244344 | 7.547659 | 8.333781 | 6.355329 | 6.082573 | 5.05485 |
| 6 | VDAG_02981 | Methyltransferase domain-containing protein | 1.048951 | 2.022277 | 2.645048 | 3.118421 | 2.771815 | 4.705878 | 1.726638 | 1.905085 | 4.283733 |
| 7 | VDAG_03099 | Glucan 1,3-beta-glucosidase | 0.304888 | 1.159252 | 1.177232 | 1.289926 | 1.029788 | 1.617254 | 1.194427 | 0.743662 | 0.829034 |
| 8 | VDAG_03536 | YetA | 14.37066 | 33.60962 | 24.66688 | 23.71565 | 30.52655 | 24.97965 | 27.41519 | 21.24693 | 27.49016 |
| 9 | VDAG_03975 | C6 zinc finger domain-containing protein | 15.00863 | 29.21758 | 18.81392 | 18.84766 | 31.24542 | 29.8705 | 26.07178 | 21.38755 | 27.99133 |
| 10 | VDAG_04598 | Glycogenin-1 | 37.06267 | 68.97229 | 48.17265 | 45.46692 | 77.10089 | 69.11893 | 70.61616 | 54.23442 | 63.30747 |
| 11 | VDAG_05008 | Peptidase M20 domain-containing protein 2 | 0.951232 | 3.683467 | 2.85524 | 2.704868 | 2.485291 | 2.347381 | 2.428679 | 2.431284 | 2.273593 |
| 12 | VDAG_05649 | BNR/Asp-box repeat domain-containing protein | 1.485317 | 5.698776 | 3.41501 | 3.134149 | 4.311877 | 5.442967 | 4.981001 | 3.789991 | 2.962473 |
| 13 | VDAG_05829 | Heat shock protein HSP98 | 2851.294 | 8213.736 | 5839.808 | 8385.88 | 7207.387 | 5492.246 | 3748.727 | 7855.11 | 6926.32 |
| 14 | VDAG_05831 | Phenylalanine ammonia-lyase | 5.327448 | 10.4713 | 14.76473 | 18.7942 | 11.65773 | 24.15234 | 5.273917 | 8.005835 | 11.82046 |
| 15 | VDAG_05832 | FAD binding domain-containing protein | 0.97946 | 5.375452 | 9.59148 | 13.22928 | 11.4021 | 29.036 | 1.738944 | 5.22337 | 11.88564 |
| 16 | VDAG_05836 | Para-hydroxybenzoate-polyprenyltransferase | 0.16421 | 0.23375 | 2.238529 | 1.346959 | 3.046437 | 4.084031 | 0.142631 | 1.331249 | 1.254863 |
| 17 | VDAG_06240 | Phytanoyl-CoA dioxygenase | 3.271209 | 4.96076 | 16.97013 | 14.02229 | 11.25868 | 20.8611 | 5.329389 | 5.988937 | 9.619971 |
| 18 | VDAG_06907 | E3 ubiquitin-protein ligase | 19.52358 | 41.99442 | 38.90181 | 40.99749 | 42.84902 | 65.42277 | 43.04462 | 32.43004 | 37.12453 |
| 19 | VDAG_07183 | Carboxypeptidase A | 0.590637 | 4.817832 | 2.275429 | 1.521062 | 2.023665 | 1.406215 | 0.779928 | 1.725569 | 0.451422 |
| 20 | VDAG_07270 | Mycocerosic acid synthase | 0.563822 | 1.191726 | 1.288242 | 1.182283 | 0.764326 | 1.502613 | 1.056965 | 0.88995 | 0.998817 |
| 21 | VDAG_07344 | Cutinase | 0 | 0.757969 | 0.60793 | 0.962218 | 1.396963 | 2.694802 | 0.561964 | 0.477185 | 1.374841 |
| 22 | VDAG_07854 | Maltose O-acetyltransferase | 2.196192 | 3.946491 | 6.820049 | 7.200627 | 3.16318 | 6.916005 | 5.754764 | 2.764381 | 4.99843 |
| 23 | VDAG_08529 | Anaphase-promoting complex subunit 8 | 13.30899 | 23.23852 | 34.1324 | 40.32327 | 24.52103 | 40.96512 | 25.52018 | 20.15623 | 27.3556 |
| 24 | VDAG_08712 | Cyanide hydratase | 0.511059 | 3.463236 | 24.39127 | 3.558516 | 18.23755 | 11.04813 | 5.794128 | 4.979065 | 1.917549 |
| 25 | VDAG_09806 | FAD binding domain-containing protein | 0.850458 | 1.504143 | 1.687359 | 1.407464 | 1.919441 | 1.757326 | 2.404167 | 1.50623 | 1.979163 |
| 26 | VDAG_10401 | Integral membrane protein | 1.080071 | 3.072609 | 4.37851 | 3.103026 | 2.956657 | 4.107363 | 3.177632 | 2.617038 | 2.934669 |