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. 2020 Feb 13;15(2):e0228926. doi: 10.1371/journal.pone.0228926

Table 1. Potential biomarker proteins, with opposite signal in Low-HF ∩ Low-MD and Low-HF ∩ High-MD MoAs.

Uniprot ID Gene symbol Gene name LMD HMD |LMDxHMD| Adjusted P-value BCP
1 P02675 FGB Fibrinogen beta chain -0.576 0.814 0.685 1.297E-03 MD
2 O43639 NCK2 Cytoplasmic protein NCK2 0.620 -0.697 0.657 1.656E-04 MD
3 P54762 EPHB1 Ephrin type-B receptor 1 0.317 -0.677 0.464 3.669E-04 HF&MD
4 Q9Y4H2 IRS2 Insulin receptor substrate 2 0.417 -0.465 0.440 8.181E-04 MD
5 O60674 JAK2 Tyrosine-protein kinase JAK2 -0.747 0.249 0.431 1.656E-04 MD
6 P06241 FYN Tyrosine-protein kinase Fyn 0.591 -0.236 0.373 2.466E-04 HF&MD
7 P30530 AXL Tyrosine-protein kinase receptor UFO 0.392 -0.330 0.360 2.111E-04 MD
8 Q02297 NRG1 Pro-neuregulin-1, membrane-bound isoform 0.672 -0.188 0.355 2.111E-04 MD
9 P32004 L1CAM Neural cell adhesion molecule L1 -0.373 0.309 0.339 1.297E-03 HF&MD
10 Q05586 GRIN1 Glutamate receptor ionotropic, NMDA 1 -0.174 0.620 0.329 1.955E-04 MD
11 P05230 FGF1 Fibroblast growth factor 1 -0.152 0.688 0.323 8.181E-04 HF&MD
12 P18084 ITGB5 Integrin beta-5 0.436 -0.236 0.321 2.111E-04 MD
13 P01583 IL1A Interleukin-1 alpha 0.174 -0.472 0.287 1.955E-04 MD
14 P10275 AR Androgen receptor 0.349 -0.201 0.265 8.008E-04 MD
15 P15941 MUC1 Mucin-1 subunit alpha 0.099 -0.652 0.254 6.905E-04 HF&MD
16 O14757 CHEK1 Serine/threonine-protein kinase Chk1 0.436 -0.142 0.248 1.549E-03 MD
17 P15391 CD19 B-lymphocyte antigen CD19 -0.131 0.357 0.216 8.160E-03 MD
18 P61981 YWHAG 14-3-3 protein gamma, N-terminally processed 0.174 -0.236 0.203 2.783E-03 -
19 Q9Y478 PRKAB1 5'-AMP-activated protein kinase subunit beta-1 0.261 -0.142 0.192 5.682E-03 MD
20 P62158 CALM1; CALM2; CALM3 Calmodulin-1 {ECO:0000312|HGNC:HGNC:1442} -0.282 0.107 0.174 9.405E-03 MD
21 P06748 NPM1 Nucleophosmin 0.261 -0.107 0.167 3.618E-03 MD
22 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 -0.261 0.094 0.157 3.618E-03 MD
23 P17081 RHOQ Rho-related GTP-binding protein RhoQ -0.218 0.094 0.143 9.794E-03 MD
24 P35354 PTGS2 Prostaglandin G/H synthase 2 0.044 -0.472 0.143 3.669E-04 MD
25 P42684 ABL2 Abelson tyrosine-protein kinase 2 -0.218 0.094 0.143 9.794E-03 MD
26 Q15109 AGER Advanced glycosylation end product-specific receptor -0.267 0.063 0.130 8.160E-03 -
27 P07585 DCN Decorin -0.044 0.236 0.101 5.682E-03 MD
28 P05155 SERPING1 Plasma protease C1 inhibitor -0.044 0.236 0.101 5.682E-03 MD
29 P05121 SERPINE1 Plasminogen activator inhibitor 1 -0.044 0.236 0.101 5.682E-03 -
30 P14770 GP9 Platelet glycoprotein IX 0.044 -0.236 0.101 5.682E-03 MD

Highlighted cells correspond to proteins that are part of the Top-HF ∪ Top-MD ∪ Top-Drug set, the top-scoring proteins according to GUILDify. Columns show: the protein name (as UniprotID, gene-symbol and gene-name), the average of the signal in in Low-MD (<LMD>) and High-MD (<HMD>) in the selected sets of MoAs and a measure of the strength of the signal in both distributions (calculated as LMDxHMD), the significance (adjusted P-value) ensuring that both distributions of signals are different, and whether the protein has been considered best-classifier in MD of HF (BCP).