Table 1. Potential biomarker proteins, with opposite signal in Low-HF ∩ Low-MD and Low-HF ∩ High-MD MoAs.
Uniprot ID | Gene symbol | Gene name | 〈LMD〉 | 〈HMD〉 | Adjusted P-value | BCP | ||
---|---|---|---|---|---|---|---|---|
1 | P02675 | FGB | Fibrinogen beta chain | -0.576 | 0.814 | 0.685 | 1.297E-03 | MD |
2 | O43639 | NCK2 | Cytoplasmic protein NCK2 | 0.620 | -0.697 | 0.657 | 1.656E-04 | MD |
3 | P54762 | EPHB1 | Ephrin type-B receptor 1 | 0.317 | -0.677 | 0.464 | 3.669E-04 | HF&MD |
4 | Q9Y4H2 | IRS2 | Insulin receptor substrate 2 | 0.417 | -0.465 | 0.440 | 8.181E-04 | MD |
5 | O60674 | JAK2 | Tyrosine-protein kinase JAK2 | -0.747 | 0.249 | 0.431 | 1.656E-04 | MD |
6 | P06241 | FYN | Tyrosine-protein kinase Fyn | 0.591 | -0.236 | 0.373 | 2.466E-04 | HF&MD |
7 | P30530 | AXL | Tyrosine-protein kinase receptor UFO | 0.392 | -0.330 | 0.360 | 2.111E-04 | MD |
8 | Q02297 | NRG1 | Pro-neuregulin-1, membrane-bound isoform | 0.672 | -0.188 | 0.355 | 2.111E-04 | MD |
9 | P32004 | L1CAM | Neural cell adhesion molecule L1 | -0.373 | 0.309 | 0.339 | 1.297E-03 | HF&MD |
10 | Q05586 | GRIN1 | Glutamate receptor ionotropic, NMDA 1 | -0.174 | 0.620 | 0.329 | 1.955E-04 | MD |
11 | P05230 | FGF1 | Fibroblast growth factor 1 | -0.152 | 0.688 | 0.323 | 8.181E-04 | HF&MD |
12 | P18084 | ITGB5 | Integrin beta-5 | 0.436 | -0.236 | 0.321 | 2.111E-04 | MD |
13 | P01583 | IL1A | Interleukin-1 alpha | 0.174 | -0.472 | 0.287 | 1.955E-04 | MD |
14 | P10275 | AR | Androgen receptor | 0.349 | -0.201 | 0.265 | 8.008E-04 | MD |
15 | P15941 | MUC1 | Mucin-1 subunit alpha | 0.099 | -0.652 | 0.254 | 6.905E-04 | HF&MD |
16 | O14757 | CHEK1 | Serine/threonine-protein kinase Chk1 | 0.436 | -0.142 | 0.248 | 1.549E-03 | MD |
17 | P15391 | CD19 | B-lymphocyte antigen CD19 | -0.131 | 0.357 | 0.216 | 8.160E-03 | MD |
18 | P61981 | YWHAG | 14-3-3 protein gamma, N-terminally processed | 0.174 | -0.236 | 0.203 | 2.783E-03 | - |
19 | Q9Y478 | PRKAB1 | 5'-AMP-activated protein kinase subunit beta-1 | 0.261 | -0.142 | 0.192 | 5.682E-03 | MD |
20 | P62158 | CALM1; CALM2; CALM3 | Calmodulin-1 {ECO:0000312|HGNC:HGNC:1442} | -0.282 | 0.107 | 0.174 | 9.405E-03 | MD |
21 | P06748 | NPM1 | Nucleophosmin | 0.261 | -0.107 | 0.167 | 3.618E-03 | MD |
22 | O15357 | INPPL1 | Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 | -0.261 | 0.094 | 0.157 | 3.618E-03 | MD |
23 | P17081 | RHOQ | Rho-related GTP-binding protein RhoQ | -0.218 | 0.094 | 0.143 | 9.794E-03 | MD |
24 | P35354 | PTGS2 | Prostaglandin G/H synthase 2 | 0.044 | -0.472 | 0.143 | 3.669E-04 | MD |
25 | P42684 | ABL2 | Abelson tyrosine-protein kinase 2 | -0.218 | 0.094 | 0.143 | 9.794E-03 | MD |
26 | Q15109 | AGER | Advanced glycosylation end product-specific receptor | -0.267 | 0.063 | 0.130 | 8.160E-03 | - |
27 | P07585 | DCN | Decorin | -0.044 | 0.236 | 0.101 | 5.682E-03 | MD |
28 | P05155 | SERPING1 | Plasma protease C1 inhibitor | -0.044 | 0.236 | 0.101 | 5.682E-03 | MD |
29 | P05121 | SERPINE1 | Plasminogen activator inhibitor 1 | -0.044 | 0.236 | 0.101 | 5.682E-03 | - |
30 | P14770 | GP9 | Platelet glycoprotein IX | 0.044 | -0.236 | 0.101 | 5.682E-03 | MD |
Highlighted cells correspond to proteins that are part of the Top-HF ∪ Top-MD ∪ Top-Drug set, the top-scoring proteins according to GUILDify. Columns show: the protein name (as UniprotID, gene-symbol and gene-name), the average of the signal in in Low-MD (<LMD>) and High-MD (<HMD>) in the selected sets of MoAs and a measure of the strength of the signal in both distributions (calculated as ), the significance (adjusted P-value) ensuring that both distributions of signals are different, and whether the protein has been considered best-classifier in MD of HF (BCP).