. 2020 Feb 13;15(2):e0229181. doi: 10.1371/journal.pone.0229181

Table 2. Genes included in Fritillaria plastid genomes.

Category for gene	Group of genes	Name of genes
Self-replication	Large subunit of ribosome	rpl2^a, rpl14, rpl16*, rpl20, rpl22, rpl23^a, rpl32, rpl33, rpl36*
	Small subunit of ribosome	rps2, rps3, rps4, rps7^a, rps8, rps11, rps12^a, rps14, rps15, rps16*, rps18, rps19*
	DNA dependent RNA polymerase	rpoA, rpoB, rpoC1, rpoC2*
	rRNA gene	rrn4.5^a, rrn5^a, rrn16^a, rrn23^a
	tRNA gene	trnK-UUU, trnI-GAU^I, trnA-UGC^a, trnG-GCC*, trnV-UAC*, trnL-UAA*, trnS-UGA, trnS-GCU, trnS-GGA, trnY-GUA, trnC-GCA, trnL-CAA^a, trnL-UAG, trnH-GUG^a, trnD-GUC, trnfM-CAU, trnW-CCA, trnP-UGG, trnI-CAU^a, trnR-ACG^a, trnI-CAU^a, trnE-UUC, trnT-UGU, trnF-GAA, trnQ-UUG, trnR-UCU, trnT-GGU, trnM-CAU, trnV-GAC^a, trnN-GUU^a, trnN-GUU^a, trnV-GAC^a, trnG-UCC*
Gene for photosynthesis	Subunits of photosystem Ⅰ	psaA, psaB, psaC, psaI, psaJ
	Subunits of photosystem Ⅱ	psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ
	Subunits of NADH-dehydrogenase	ndhA, ndhB^I, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK
	Subunits of cytochrome b/f complex	petA, petB, petD*, petG, petL, petN*
	Subunit for ATP synthase	atpA, atpB, atpE, atpF, atpH, atpI*
	Large subunit of rubisco	rbcL
Other genes	Translational initiation factor	infA
	Maturase	matK
	Protease	clpP*
	Envelope membrane protein	cemA
	Subunit of Acetyl-carboxylase	accD
	C-type cytochrome synthesis gene	ccsA
	Open reading frames (ORF,ycf)	ycf1, ycf2^a, ycf3, ycf4, ycf15^a, ycf68*^a

The lowercase letter a in superscript after gene names indicates genes located in IR regions. Asterisks indicate intron-containing genes.