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. Author manuscript; available in PMC: 2020 Oct 3.
Published in final edited form as: Cell Stem Cell. 2019 Sep 5;25(4):542–557.e9. doi: 10.1016/j.stem.2019.08.004

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Anti-human IFN-γ (ELISA, capture) BD Biosciences CAT#551221, RRID: AB_394099
Anti-human IFN-γ (ELISA, detection) BD Biosciences CAT#554550, RRID: AB_395472
Anti-human IL-4 (ELISA, capture) BD Biosciences CAT#554515; RRID: AB_398567
Anti-human IL-4 (ELISA, detection) BD Biosciences CAT#554483; RRID: AB_395422
Anti-human IL-2 (ELISA, capture) BD Biosciences CAT#554563; RRID: AB_398570
Anti-human IL-2 (ELISA, detection) BD Biosciences CAT#555040; RRID: AB_395666
Anti-human CD3 (Clone HIT3a; LEAF purified) Biolegend CAT#300314, RRID: AB_314050
Anti-human CD28 (Clone CD28.2; LEAF purified) Biolegend CAT#302902, RRID: AB_314304
Anti-human CD45 (Clone H130) Biolegend CAT#304026, RFID: AB_893337
Anti-human TCR(alpha)(beta) (Clone I26) Biolegend CAT#306716, RRID: AB_1953257
Anti-human CD4 (Clone OKT4) Biolegend CAT#317414, RRID: AB_571959
Anti-human CD8 (Clone SK1) Biolegend CAT#344714, RRID: AB_2044006
Anti-human CD45RO (Clone UCHL1) Biolegend CAT#304216, RRID: AB_493659
Anti-human CD45RA (Clone HI100) Biolegend CAT#304126, RRID: AB_10708879
Anti-human CD161 (Clone HP-3G10) Biolegend CAT#339928, RRID: AB_2563967
Anti-human CD69 (Clone FN50) Biolegend CAT#310914, RRID: AB_314849
Anti-human CD56 (Clone HCD56) Biolegend CAT#318304, RRID: AB_604100
Anti-human CD62L (Clone DREG-56) Biolegend CAT#304822, RRID: AB_830801
Anti-human CD14 (Clone HCD14) Biolegend CAT#325608, RRID: AB_830681
Anti-human CD11b (Clone ICRF44) Biolegend CAT#301330, RRID: AB_2561703
Anti-human CD11c (Clone N418) Biolegend CAT#337234, RRID: AB_2566656
Anti-human CD20 (Clone 2H7) Biolegend CAT#555623, RRID: AB_395989
Anti-human HLA-A2 (Clone BB7.2) Biolegend CAT#558570, RRID: AB_647220
Anti-human CD1d (Clone 51.1) Biolegend CAT#350308, RRID: AB_10642829
Anti-human PD-1 (Clone EH12.2H7) Biolegend CAT#329908, RRID: AB_940475
Anti-human CCR4 (Clone L291H4) Biolegend CAT#359409, RRID: AB_2562430
Anti-human CCR5 (Clone HEK/1/85a) Biolegend CAT#313705, RRID: AB_345305
Anti-human CXCR3 (Clone G025H7) Biolegend CAT#306513, RRID: AB_2089652
Anti-human NKG2D (Clone 1D11) Biolegend CAT#320812, RRID: AB_2234394
Anti-human IFNγ (Clone B27) Biolegend CAT#506518, RRID: AB_2123321
Anti-human Granzyme B (Clone QA16A02) Biolegend CAT#372204, RRID: AB_2687028
Anti-human Perforin (Clone dG9) Biolegend CAT#308126, RRID: AB_2572049
Anti-human TNFα (Clone Mab11) Biolegend CAT#502912, RRID: AB_315264
Anti-human IL-2 (Clone MQ1–17H12) Biolegend CAT#500341, RRID: AB_2562854
Anti-human IL-4 (Clone MP4–25D2) Biolegend CAT#500812, RRID: AB_315131
Anti-human IL-17 (Clone BL168) Biolegend CAT#512334, RRID: AB_2563986
Anti-human CD34 (Clone 581) BD Biosciences CAT#555822, RRID: AB_396151
Anti-human TCR V(alpha)24-J(alpha)18 (Clone 6B11) BD Biosciences CAT#552825, RRID: AB_394478
Anti-human TCR V(beta)11 Beckman-Coulter CAT#A66905
Anti-human PLZF (Clone 9E12) eBioscience CAT#19-9322-82, RRID: AB_2637113
Anti-human T-bet (Clone 4B10) eBioscience CAT#25-5825-80, RRID: AB_11041809
Anti-mouse CD1d (Clone 1B1) eBioscience CAT#17-0011-82, RRID: AB_2573135
Mouse lgG2b, κ isotype control antibody (Clone MPC-11) Biolegend CAT#400320
Rat lgG2b, κ isotype control antibody (Clone eB149/10H5) eBioscience CAT#17-4031-82, RRID: AB_470176
Human Fc Receptor Blocking Solution (TrueStain FcX) Biolegend CAT#422302
Mouse Fc Block (anti-mouse CD16/32) BD Biosciences CAT#553142, RRID: AB_394657
Anti-human CD1d antibody (Clone 51.1; LEAF purified) Biolegend CAT#350304, RRID: AB_10641291
Mouse lgG2b, κ isotype control antibody (Clone MG2b-57; LEAF purified) Biolegend CAT#401212
Tetramer/Dextramer
hCD1d/PBS-57 tetramer NIH Tetramer Core Facility N/A
HLA-A2/NY-ES0–1157–165 dextramer This paper N/A
Bacterial and Virus Strains
Lenti/iNKT This paper N/A
Lenti/iNKT-EGFP This paper N/A
Lenti/iNKT-sr39TK This paper N/A
Lenti/FG This paper N/A
Lenti/CD1d This paper N/A
Lenti/IL-15-FG This paper N/A
Lenti/ESO-sr39TK This paper N/A
Lenti/HLA-A2 This paper N/A
Lenti/NY-ESO-1 This paper N/A
Biological Samples
Human peripheral blood mononuclear cells (PBMCs) UCLA N/A
Human fetal liver UCLA N/A
Human cord blood CD34+ hematopoietic stem and progenitor cells (CB HSCs) UCLA N/A
Fetal thymus tissues UCLA N/A
Postnatal human thymus CHLA N/A
G-CSF-mobilized peripheral blood units CCHMC CAT#M001F-GCSF-3
G-CSF-mobilized leukopak HemaCare CAT#M001CLPG-4-KIT
Chemicals, Peptides, and Recombinant Proteins
Streptavidin-HRP conjugate Invitrogen CAT#SA10001
Recombinant IL-2 (ELISA, standard) eBioscience CAT#570409
Recombinant human IL-4 (ELISA, standard) eBioscience CAT#571809
Recombinant human IL-17 (ELISA, standard) eBioscience CAT#570509
Recombinant human IFN-γ (ELISA, standard) eBioscience CAT#570209
Tetramethylbenzidine (TMB) KPL CAT#5120–0053
Ganciclovir (GCV) Sigma CAT#ADV465749843
α-Galactosylceramide (KRN7000) Avanti Polar Lipids SKU#867000P-1mg
Recombinant human IL-2 Peprotech CAT#200–02
Recombinant human IL-3 Peprotech CAT#200–03
Recombinant human IL-4 Peprotech CAT#200–04
Recombinant human IL-7 Peprotech CAT#200–07
Recombinant human IL-15 Peprotech CAT#200–15
Recombinant human Flt3-Ligand Peprotech CAT#300–19
Recombinant human SCF Peprotech CAT#300–07
Human NY-ESO-1157–165 peptide ThermoFisher N/A
Recombinant human TPO Peprotech CAT#300–18
Recombinant human GM-CSF Peprotech CAT#300–03
X-VIVO 15 Serum-free Hematopoietic Cell Medium Lonza CAT#04–418Q
RPMI1640 cell culture medium Corning Cellgro CAT#10–040-CV
DMEM cell culture medium Corning Cellgro CAT#10–013-CV
Fetal Bovine Serum (FBS) Sigma CAT#F2442
Penicillin-Streptomycine-Glutamine (P/S/G) Gibco CAT#10378016
MEM non-essential amino acids (NEAA) Gibco CAT#11140050
HEPES Buffer Solution Gibco CAT#15630056
Sodium Pyruvate Gibco CAT#11360070
Beta-Mercaptoethanol Sigma SKU#M6250
Normocin Invivogen CAT#ant-nr-2
Fixable Viability Dye eFluor506 affymetrix eBioscience CAT#65-0866-14
Cell Fixation/Permeabilization Kit BD Biosciences CAT#554714
RetroNectin recombination human fibronectin fragment, 2.5mg Takara CAT#T100B
10% neutral-buffered formalin Richard-Allan Scientific CAT#5705
D-Luciferin Caliper Life Science CAT#XR-1001
Isoflurane Zoetis CAT#50019100
Phosphate Buffered Saline (PBS) pH 7.4 (1X) Gibco CAT#10010–023
Phorbol-12-myristate-13-acetate (PMA) Calbiochem CAT#524400
lonomycin, Calcium salt, Streptomyces conglobatus Calbiochem CAT#407952
Critical Commercial Assays
IOTest beta Mark TCR Vβ Repertoire Kit Beckman-Coulter CAT#IM3497
OneStep RT-PCR kit Qiagen CAT#210212
NK Cell Isolation Kit Miltenyi Biotec CAT#130-092-657
Human CD14 Microbeads Miltenyi Biotec CAT# 130-050-201
Fixation/Permeabilization Solution Kit BD Sciences CAT#55474
Human IL-17A ELISA MAX Deluxe Kit Biolegend CAT#433915
Deposited Data
N/A
Experimental Models: Cell Lines
Human multiple myeloma (MM) cell line MM.1S ATCC CRL-2974
Human chronic myelogenous leukemia cancer cell line K562 ATCC CCL-243
Human melanoma cell line A375 ATCC CRL-1619
Human multiple myeloma (MM) cell line MM.1S-FG This paper N/A
Human multiple myeloma (MM) cell line MM.1S-hCD1d-FG This paper N/A
Human chronic myelogenous leukemia cancer cell line K562-FG This paper N/A
Human melanoma cell line A375-hlL-15-FG This paper N/A
Human melanoma cell line A375-hlL-15-hCD1d-FG This paper N/A
Human melanoma cell line A375-A2-ESO-FG This paper N/A
Experimental Models: Organisms/Strains
NOD.Cg-Prkdcscid II2rgtm1Wjl/SzJ The Jackson Laboratory Stock #: 005557
Human bone marrow-liver-thymus (BLT) engrafted NSG mice This paper N/A
Human iNKT TCR gene-engineered bone marrow-liver-thymus (BLT) mice This paper N/A
Secondary BLT-iNKT mice This paper N/A
BLT-iNKT mice generated using Lenti/iNKT-sr39TK vector-transduced PBMCs This paper N/A
Oligonucleotides
Primer: TCRα Forward: GCTCTCTGCACATCACAGCCTCCCAG IDT N/A
Primer: TCRβ Forward: CCACAGAGAAGGGAGATCTTTCCTCTGAGTC IDT N/A
Recombinant DNA
Vector: parental lentivector pMNDW Giannoni et al., 2013 and Lan et al.,2006 N/A
Software and Algorithms
FlowJo Software FlowJo https://www.flowio.com/solutions/flowio/downloads
OsiriX Imaging Software OsiriX https://www.osirix-viewer.com/
Living Imaging 2.50 software Xenogen/PerkinElmer http://www.Derkinelmer.com/lab-croducts-and-services/resources/in-vivo-imaqinq-software-downloads.html
Prism 6 Graphpad https://www.ararjhrjad.com/scientific-software/orism/
I-control 1.7 Microplate Reader Software Tecan https://www.selectscience.net/tecan/i-control-microplate-reader-software/81307