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. 2020 Feb 13;10:2537. doi: 10.1038/s41598-020-59488-0

Figure 2.

Figure 2

Phylogeny of Rickettsia constructed using maximum-likelihood (ML) estimations based on gltA gene sequences (589 unambiguously aligned nucleotide sites; best-fit approximation for the evolutionary model: GTR + G + I). Sequences from Rickettsia characterized in this study are shown in red. Only one gltA sequence per Rickettsia genotype and per tick species is shown. Sequences from representative Rickettsia groups, species and strains available in GenBank were also added to the analysis. The grey boxes delineate the different Rickettsia groups (their names are indicated in upper case), including the novel guiana group described in this study. Bacterial name, host species and GenBank accession numbers are shown on the tree. Branch numbers indicate percentage bootstrap support for major branches (1000 replicates; only bootstrap values >70% are shown). The scale bar is in units of substitution/site.