Table 2.

Nanopore sequencing metrics for DENV RNA standards, using the multiplex (400 bp amplicon) approach

Serotype	Genotype	Reads passing QC	Coding-Region Coverage (%)		Nucleotide Consensus Similarity (%)
			1X	20X	1X	20X
1	I	8604	100	96.51	99.92	99.88
2	IV	14,265	100	87.56	99.50	99.81
3	V	8337	100	89.93	99.28	99.69
4	I	16,654	100	89.96	99.25	99.72