Table 1.
Potato genomes sequenced for this study. The table shows their ploidy level and the number of SNPs identified when they were compared to the two reference genomes
| Genome | Ploidy | SNPs VS DM1-3 | 1 Variant per x bases | SNPs VS M6 | 1 Variant per x bases | % Heterozygosity |
|---|---|---|---|---|---|---|
| GON1 | 2x | 4,452,845 | 133 | 4,259,520 | 95 | 1.75 |
| GON2 | 2x | 4,637,259 | 126 | 4,960,736 | 80 | 1.73 |
| PHU | 2x | 3,885,936 | 152 | 3,862,547 | 104 | 1.84 |
| STN | 2x | 5,366,637 | 110 | 4,607,143 | 88 | 2.06 |
| AJH | 2x | 6,738,160 | 87 | 5,503,098 | 73 | 4.48 |
| BUK | 2x | 6,962,470 | 83 | 5,695,484 | 71 | 3.06 |
| ADG1 | 4x | 10,488,244 | 49 | 7,978,402 | 50 | 3.52 |
| ADG2 | 4x | 9,998,123 | 52 | 7,763,459 | 51 | 7.75 |
| TBR | 4x | 9,089,933 | 58 | 7,188,156 | 56 | 8.43 |
| JUZ | 3x | 10,584,983 | 48 | 8,631,219 | 46 | 7.3 |
| CHA | 3x | 6,614,894 | 83 | 5,350,001 | 76 | 3.7 |
| CUR | 5x | 12,968,439 | 37 | 8,873,871 | 45 | 12.02 |