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. 2020 Feb 14;10:2657. doi: 10.1038/s41598-020-59583-2

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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(a) A 2-D mapping of the Meta-II-P23H LSF from MD simulation. The different colors in the network mapping of the LSFs represent regions of correlated fluctuations. (b) A C-α representation of the dominant PCA mode (PCA1) of Meta -II-P23H from MD simulation. Regions colored in blue represent areas of less mobility and regions in red illustrate regions with more mobility. (c) Cartoon representations of Meta-II rhodopsin showing the mapping of the Meta-II LSF from the MD simulation onto the rhodopsin 3-D structure. (d) A 2-D mapping of the Meta-II LSF and (e) the C-α representation of the PCA1 of Meta-II from MD simulation.