Table 2.
Significant differentially expressed lncRNAs and their targeted genes.
lncRNAs | Log2FC | p | 10 kb Upstream | 10 kb Downstream | 100 kb Upstream | 100 kb Downstream |
---|---|---|---|---|---|---|
XLOC_025357 | 1.84 | 5 × 10−5 | ERICH4, BCKDHA, TMEM91, DMAC2, B3GNT8, EXOSC5, B9D2, TGFB1 | |||
XLOC_038367 | −2.24 | 5 × 10−5 | IQSEC1 | |||
XLOC_048194 | 1.82 | 5 × 10−5 | EDN3 | |||
XLOC_051797 | 1.61 | 8 × 10−4 | STX17 | |||
XLOC_032225 | −3.33 | 1.15 × 10−3 | PHRF1 | LMNTD2, RASSF7 | IRF7, CDHR5, SCT, DEAF1, PHRF1, DRD4 | LMNTD2, HRAS, LOC155356, RASSF7, LRRC56, LOC121596 |
XLOC_000736 | 3.53 | 1.45 × 10−3 | PLAU, C1H1orf55, CAMK2G | VCL | ||
XLOC_050107 | 2.64 | 2.35 × 10−3 | IFNE | |||
XLOC_055900 | −2.14 | 4.25 × 10−3 | IL17REL | IL17REL, TTLL8 | ALG12, PIM3, LOC11177138, CRELD2, ZBED4 | |
XLOC_021555 | 1.66 | 6.9 × 10−3 | TBX3 | |||
XLOC_043830 | −2.91 | 7.05 × 10−3 | MFSD1 | MFSD1, LOC15252 | ||
XLOC_017294 | −2.38 | 0.01 | KIAA1551 | AMN1, ETFBKMT | ||
XLOC_015361 | −2.56 | 0.01 | TEX44, NMUR1, LOC1214915 | PTMA, PDE6D | ||
XLOC_056998 | 2.36 | 0.01 | ELF3, RNPEP, TIMM17A | GPR37L1, LOC1146338, LGR6, ARL8A, PTPN7 | ||
XLOC_016995 | 2.23 | 0.01 | KCNA5 | |||
XLOC_021660 | −7.36 | 0.02 | RILPL1 | TMED2 | SNRNP35, KMT5A, RILPL1, RILPL2 | TMED2, DDX55, GTF2H3, TCTN2, ATP6VA2, EIF2B1 |
XLOC_042377 | 2.12 | 0.03 | TSN, NIFK | |||
XLOC_059454 | 1.91 | 0.03 | CD99, XG | ZBED1, DHRSX | ||
XLOC_008338 | −2.20 | 0.03 | COQ2, HPSE | LOC163244, PLAC8 | ||
XLOC_022706 | 2.09 | 0.04 | TBX3 | |||
XLOC_027025 | −1.31 | 0.04 | LOC17567 | IGSF23 | LOC17567, CEACAM19, CEACAM16 | ZNF18, IGSF23 |
Note: log2FC = log2 of fold change. Genes having possible biological functions contributing to growth are indicated in bold font.