Table 6.

Indicator species analysis.

OTU (Genus)	Associated with	Indicator Value	p-Value	Relative Abundance (%)
Succinivibrionaceae_uncultured	HE	0.996	0.002 **	32.23
Veillonellaceae_unclassified	HE	0.996	0.002 **	2.90
Veillonellaceae_uncultured	HE	0.987	0.002 **	4.59
Bacteroidales_norank	LE	0.994	0.002 **	6.13
Lachnospiraceae_uncultured	LE	0.966	0.002 **	2.89

Associations were calculated with the Dufrene-Legendre indicator species analysis routine (Indval, indicator value) in R. Data table shows results for the analysis where rare OTUs (<1% relative abundance) were excluded. Significance levels: ** p ≤ 0.01. The p-values were corrected for multiple comparisons using the false discovery rate (FDR) with the Benjamini-Hochberg method.