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. 2020 Jan 9;8(1):88. doi: 10.3390/microorganisms8010088

Table 1.

Summary of the transcriptome assembly of strain MC1. Control (CK 0M) and salt-treated (1.7 M) raw read filters.

Sample Raw Reads Raw Bases %≥Q30 Clean Reads Clean Bases Mapped-Reads Mapped Rate (%) GC(%) %≥Q30 Error(%)
MC1-CK-1 13,471,728 2,020,759,200 91.21 11,691,054 1,726,157,998 10,887,922 93.13 56.93 93.90 0.0137
MC1-CK-2 15,215,384 2,282,307,600 91.1 12,979,384 1,912,783,427 11,812,868 91.01 56.67 93.81 0.0138
MC1-CK-3 16,388,692 2,458,303,800 91.5 14,177,492 2,094,489,027 13,124,998 92.58 56.44 94.01 0.0136
MC1-1 13,820,672 2,073,100,800 94.9 12,093,922 1,783,589,346 10,993,370 90.90 55.94 96.86 0.0109
MC1-2 16,604,690 2,490,703,500 93.72 14,554,380 2,145,906,752 12,859,768 88.36 56.12 96.07 0.0115
MC1-3 16,857,140 2,528,571,000 93.64 14,246,340 2,090,108,492 12,558,154 88.15 55.82 96.07 0.0115