Workflow illustrating the development of STSDBs. MS data is processed and a composite chemical characteristic quality score (CCC-QS) is derived. The number of times a compound has been detected is included in an overall quality score (Ov-QS). Compounds are searched using traditional DBs to obtain initial annotations, resulting in a prototypic STSDB. Additional identifying information is added to each compound, including MS/MS spectra, collisional cross section (CCS) values, and data from authentic standards (Stds), if available. The prototypic DB is manually curated to ensure quality and confidence levels are added to each compound.