Table 1.
Genome statistics of Acidithiobacillus ferrooxidans YNTRS-40.
| Attribute | Value | % of Total 1 |
|---|---|---|
| Genome size (bp) | 3,257,037 | 100.00 |
| DNA coding (bp) | 2,940,490 | 90.28 |
| DNA G + C (bp) | 1,905,651 | 58.51 |
| DNA scaffolds | 2 | 100.00 |
| Total genes | 3419 | 100.00 |
| Protein coding genes | 3349 | 97.95 |
| RNA genes | 70 | 2.05 |
| Pseudo genes | NA 2 | NA 2 |
| Genes in internal clusters | 8 | 16.21 |
| Genes with function prediction | 1692 | 50.52 |
| Genes assigned to COGs | 1793 | 53.54 |
| Genes with Pfam domains | 2539 | 75.81 |
| Genes with signal peptides | NA 2 | NA 2 |
| Genes with transmembrane helices | NA 2 | NA 2 |
| CRISPR repeats | 0 | 0 |
1 The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome; 2 NA, not applicable.