Table 2.
Number of genes associated with general COGs functional categories.
| Code | Value | % Age 1 | Description |
|---|---|---|---|
| J | 172 | 5.14 | Translation, ribosomal structure, and biogenesis |
| A | 0 | 0 | RNA processing and modification |
| K | 118 | 3.52 | Transcription |
| L | 126 | 3.76 | Replication, recombination, and repair |
| B | 1 | 0.03 | Chromatin structure and dynamics |
| D | 29 | 0.87 | Cell cycle control, Cell division, chromosome partitioning |
| Y | 0 | 0 | Nuclear structure |
| V | 90 | 2.69 | Defense mechanisms |
| T | 87 | 2.60 | Signal transduction mechanisms |
| M | 162 | 4.84 | Cell wall/membrane/envelope biogenesis |
| N | 20 | 0.60 | Cell motility |
| Z | 0 | 0 | Cytoskeleton |
| W | 14 | 0.42 | Extracellular structures |
| U | 62 | 1.85 | Intracellular trafficking, secretion, and vesicular transport |
| O | 96 | 2.87 | Posttranslational modification, protein turnover, chaperones |
| C | 129 | 3.85 | Energy production and conversion |
| G | 93 | 2.78 | Carbohydrate transport and metabolism |
| E | 137 | 4.09 | Amino acid transport and metabolism |
| F | 53 | 1.58 | Nucleotide transport and metabolism |
| H | 108 | 3.22 | Coenzyme transport and metabolism |
| I | 72 | 2.15 | Lipid transport and metabolism |
| P | 135 | 4.03 | Inorganic ion transport and metabolism |
| Q | 34 | 1.02 | Secondary metabolites biosynthesis, transport, and catabolism |
| R | 138 | 4.12 | General function prediction only |
| S | 51 | 1.52 | Function unknown |
| X | 88 | 2.63 | Mobilome: prophage, transposons |
| - | 1334 | 39.83 | Not in COGs |
1 The total is based on the total number of protein coding genes (3349) in the genome.