Table 1.
Nearest Gene | Chr | Marker | Risk Allele | P-value | Odds Ratio | Cases (N) | Controls (N) | Study |
---|---|---|---|---|---|---|---|---|
Loci with initial genome-wide significant evidence (P<5 × 10−8) and at least one additional replication | ||||||||
TRANK1 | 3p22 | rs9834970 | C | 2.4 × 10−11 | 1.18 | 6,658 | 7,155 | Chen et al,22 2011 |
4.8 × 10−8 | 1.12 | 9,747 | 14,278 | Muhleisen et al,24 2014 | ||||
ANK3 | 10q21 | rs10994415 | C | 6.9 × 10−11 | 1.27 | 9,747 | 14,278 | Muhleisen et al,24 2014 |
ODZ4 | 11q14 | rs12576775 | A | 4.4 × 10−8 | 0.88 | 11,974 | 51,792 | PGC-BD et al,20 2011 |
6.2 × 10−9 | 0.88 | 13,192 | 54,705 | Green et al,23 2013 | ||||
4.5 × 10−9 | 0.85 | 9,747 | 14,278 | Muhleisen et al,24 2014 | ||||
CACNA1C | 12p13 | rs4765913 | A | 1.5 × 10−8 | 1.14 | 11,974 | 51,792 | PGC-BD et al,20 2011 |
9.8 × 10−10 | 1.14 | 13,192 | 54,705 | Green et al,23 2013 | ||||
NCAN | 19p13 | rs1064395 | A | 2.1 × 10−9 | 1.17 | 7,759 | 34,062 | Cichon et al,21 2011 |
Loci with initial genome-wide significant evidence (P < 5 × 10−8) | ||||||||
RHEBL1/DHH | 12q13 | rs7296288 | A | 9.0 × 10−9 | 0.90 | 13,192 | 54,705 | Green et al,23 2013 |
TRPC4AP | 20q11 | rs3818253 | A | 3.9 × 10−8 | 1.16 | 8,699 | 12,163 | Green et al,23 2013 |
ADCY2 | 5p15 | rs17826816 | G | 9.9 × 10−9 | 1.14 | 9,747 | 14,278 | Muhleisen et al,24 2014 |
MIR2113; POU3F2 | 6q16 | rs12202969 | A | 1.1 × 10−8 | 1.12 | 9,747 | 14,278 | Muhleisen et al,24 2014 |
PTGFR | 1p31 | rs4650608 | T | 8.4 × 10−9 | 0.88 | 7,773 | 9,883 | Chen et al,22 2011 |
LMAN2L | 2q11 | rs2271893 | G | 5.2 × 10−9 | 0.86 | 7,773 | 9,883 | Chen et al,22 2011 |
Many genes | 3p21 | rs7618915 | G | 1.6 × 10−9 | 0.87 | 7,773 | 9,883 | Chen et al,22 2011 |
SYNE1 | 6q25 | rs9371601 | T | 2.9 × 10−8 | 1.10 | 9,368 | 10.929 | Green et al,74 2013 |
Loci with subsequent evidence for replication in an independent sample are shown in the top part of the table, while loci with initial evidence for genome-wide significance only are shown in the bottom of the table. Although studies are listed independently, there is substantial overlap among the cases and controls between the studies.