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. Author manuscript; available in PMC: 2020 Feb 17.
Published in final edited form as: Psychiatr Clin North Am. 2016 Mar;39(1):139–155. doi: 10.1016/j.psc.2015.10.004

Table 1.

Genome-wide significant loci in bipolar disorder

Nearest Gene Chr Marker Risk Allele P-value Odds Ratio Cases (N) Controls (N) Study
Loci with initial genome-wide significant evidence (P<5 × 10−8) and at least one additional replication

 TRANK1 3p22 rs9834970 C 2.4 × 10−11 1.18 6,658 7,155 Chen et al,22 2011
4.8 × 10−8 1.12 9,747 14,278 Muhleisen et al,24 2014

 ANK3 10q21 rs10994415 C 6.9 × 10−11 1.27 9,747 14,278 Muhleisen et al,24 2014

 ODZ4 11q14 rs12576775 A 4.4 × 10−8 0.88 11,974 51,792 PGC-BD et al,20 2011
6.2 × 10−9 0.88 13,192 54,705 Green et al,23 2013
4.5 × 10−9 0.85 9,747 14,278 Muhleisen et al,24 2014

 CACNA1C 12p13 rs4765913 A 1.5 × 10−8 1.14 11,974 51,792 PGC-BD et al,20 2011
9.8 × 10−10 1.14 13,192 54,705 Green et al,23 2013

 NCAN 19p13 rs1064395 A 2.1 × 10−9 1.17 7,759 34,062 Cichon et al,21 2011

Loci with initial genome-wide significant evidence (P < 5 × 10−8)

 RHEBL1/DHH 12q13 rs7296288 A 9.0 × 10−9 0.90 13,192 54,705 Green et al,23 2013

 TRPC4AP 20q11 rs3818253 A 3.9 × 10−8 1.16 8,699 12,163 Green et al,23 2013

 ADCY2 5p15 rs17826816 G 9.9 × 10−9 1.14 9,747 14,278 Muhleisen et al,24 2014

 MIR2113; POU3F2 6q16 rs12202969 A 1.1 × 10−8 1.12 9,747 14,278 Muhleisen et al,24 2014

 PTGFR 1p31 rs4650608 T 8.4 × 10−9 0.88 7,773 9,883 Chen et al,22 2011

 LMAN2L 2q11 rs2271893 G 5.2 × 10−9 0.86 7,773 9,883 Chen et al,22 2011

 Many genes 3p21 rs7618915 G 1.6 × 10−9 0.87 7,773 9,883 Chen et al,22 2011

 SYNE1 6q25 rs9371601 T 2.9 × 10−8 1.10 9,368 10.929 Green et al,74 2013

Loci with subsequent evidence for replication in an independent sample are shown in the top part of the table, while loci with initial evidence for genome-wide significance only are shown in the bottom of the table. Although studies are listed independently, there is substantial overlap among the cases and controls between the studies.

Data from Refs.2024,74