Table 2.
Percentage sequence similarity matrix of identified Apple necrotic mosaic virus from different varieties with submitted isolates from China and Korea
| Isolate/isolate | ApNMV-OS | ApNMV-RD | ApNMV-FA | ApNMV-GD | ApNMV-RLD | ApNMV-1 | ApNMV-2 | ApNMV-3 | ApNMV-4 | ApNMV-5 |
|---|---|---|---|---|---|---|---|---|---|---|
| ApNMV-OS | 100 | |||||||||
| ApNMV-RD | 98 | 100 | ||||||||
| ApNMV-FA | 100 | 98.1 | 100 | |||||||
| ApNMV-GD | 89.8 | 88.7 | 89.5 | 100 | ||||||
| ApNMV-RLD | 89.8 | 88.7 | 89.5 | 100 | 100 | |||||
| ApNMV-1 | 89.8 | 89.0 | 89.8 | 99.3 | 99.3 | 100 | ||||
| ApNMV-2 | 88.6 | 87.8 | 88.6 | 94.6 | 94.6 | 95.0 | 100 | |||
| ApNMV-3 | 88.3 | 87.8 | 88.3 | 93.4 | 93.4 | 93.7 | 97.7 | 100 | ||
| ApNMV-4 | 87.7 | 87.1 | 87.7 | 92.5 | 92.5 | 92.8 | 93.7 | 94.2 | 100 | |
| ApNMV-5 | 86.7 | 85.0 | 86.7 | 90.7 | 90.7 | 91.3 | 95.0 | 96.2 | 91.3 | 100 |
ApNMV-1 Apple necrotic mosaic virus Hua China (MG924901), ApNMV-2 Apple necrotic mosaic virus Hai_Crabapple_China (MG924900), ApNMV-3 Apple necrotic mosaic virus Qu_Apple China (MG924902), ApNMV-4 Apple necrotic mosaic virus China (NC040470), ApNMV-5 Apple necrotic mosaic virus Korea (LC276940), ApNMV-GD Apple necrotic mosaic virus Golden Delicious isolate, ApNMV-OS Apple necrotic mosaic virus Oregon spur isolate, ApNMV-RD Apple necrotic mosaic virus Red Delicious isolate, ApNMV-FA Apple necrotic mosaic virus Fuji Aztec isolate, ApNMV-RLD Apple necrotic mosaic virus Royal Delicious isolate