Table 3.
Validation of the most potent interactions identified in the in vitro binding assay at 10 μM (see Methods, Fig. 2, Supplementary Table 5) using an orthogonal assay that directly measures kinase catalytic activity using a widely-validated radiometric assay40.
Kinase Group | Gene Name | Kinase complex and aliases | Niraparib | Rucaparib |
---|---|---|---|---|
CMGC | DYRK1B | — | 82% | 53% |
CMGC | CDK16 | CDK16/cyclin Y (PCTAIRE, PCTK1) | n.b. | 82% |
CAMK | PIM3 | — | 15% | 78% |
CMGC | DYRK1A | DYRK1 | 76% | 49% |
CMGC | HIPK1 | — | 40% | −16% |
CAMK | MYLK4 | — | 19% | 36% |
Other | AURKB | Aurora B | 34% | n.b. |
CMGC | HIPK2 | — | 23% | −6% |
CAMK | PIM1 | — | 22% | 27%* |
CMGC | CSNK2A1 | CK2a | 12% | 21% |
AGC | LATS2 | — | 17% | n.b. |
CMGC | CSNK2A2 | CK2a2 | −1% | 17% |
AGC | CIT | STK21 | 10% | 15% |
Other | HASPIN | Haspin | 10% | −6% |
CMGC | CDK4 | CDK4/cyclin D3 | n.b. | 10% |
CMGC | HIPK3 | — | 5% | −12% |
CAMK | TSSK3 | STK22C | n.b. | −1% |
PKL | PIK3C3 | VPS34 | −1%* | n.b. |
CAMK | PIM2 | — | −5% | n.b. |
CAMK | STK17A | DRAK1 | n.d. | −6% |
The table displays the average of duplicate (n = 2) measurements of the percentage of enzyme inhibition relative to DMSO controls sorted by maximum percentage of inhibition. All assays were performed using 1 μM drug concentration and the appropriate Km concentration of ATP. From all the tested kinases, only 4 inhibit the enzyme by >50%. These four most potent interactions, expected to be submicromolar, are displayed at the top of the table and in bold. n.b. not binding. n.d. not determined due to low binding (Supplementary Table 5). * n = 1.