Table 1.
TaqMan assay details used in the custom microglial gene signature array
| Gene symbol | Gene name | Assay ID |
|---|---|---|
| 18s rRNA | 18s ribosomal RNA | Hs99999901_s1 |
| GAPDH | Glyceraldehyde‐3‐phosphate dehydrogenase | Hs99999905_m1 |
| HPRT | Hypoxanthine Phosphoribosyltransferase | Hs99999909_m1 |
| GUSB | Glucuronidase Beta | Hs99999908_m1 |
| APOE | apolipoprotein E | Hs00171168_m1 |
| C1QA | complement C1q A chain | Hs00706358_s1 |
| C1QB | complement C1q B chain | Hs00608019_m1 |
| ITGAM | integrin subunit alpha M | Hs00167304_m1 |
| CSF1R | colony stimulating factor 1 receptor | Hs00911250_m1 |
| CX3CR1 | C‐X3‐C motif chemokine receptor 1 | Hs01922583_s1 |
| GAS6 | growth arrest‐specific 6 | Hs01090305_m1 |
| GPR34 | G protein‐coupled receptor 34 | Hs00271105_s1 |
| AIF1 | allograft inflammatory factor 1 | Hs00610419_g1 |
| MERTK | MER proto‐oncogene, tyrosine kinase | Hs01031979_m1 |
| OLFML3 | Olfactomedin‐like 3 | Hs01113293_g1 |
| PROS1 | protein S (alpha) | Hs00165590_m1 |
| SALL1 | spalt‐like transcription factor 1 | Hs01548765_m1 |
| SLCO2B1 | solute carrier organic anion transporter family member 2B1 | Hs01030343_m1 |
| TGFBR1 | transforming growth factor beta receptor 1 | Hs00610320_m1 |
| TMEM119 | transmembrane protein 119 | Hs01938722_u1 |
| TREM2 | triggering receptor expressed on myeloid cells 2 | Hs00219132_m1 |
| BIN1 | bridging integrator 1 | Hs00184913_m1 |
| CD33 | CD33 molecule | Hs01076282_g1 |
| SPI1 | Spi‐1 proto‐oncogene | Hs02786711_m1 |
| HEXB | hexosaminidase subunit beta | Hs01077594_m1 |
| ITM2B | integral membrane protein 2B | Hs00222753_m1 |
| C3 | complement component 3 | Hs00163811_m1 |
| A2M | alpha‐2‐macroglobulin | Hs00929971_m1 |
| C1QC | complement C1q C chain | Hs00757779_m1 |
| RGS1 | regulator of G‐protein signaling 1 | Hs01023772_m1 |
| FTL | ferritin light chain | Hs00830226_gH |
| P2RY12 | purinergic receptor P2Y12 | Hs01881698_s1 |