Table 9.
Gene ontology enrichment analysis
| ID | Term | Gene | Count | P value |
| GO: 0043392 | Negative regulation of DNA binding | WFIKKN2, SP100, HAND2, HMOX1, HMGA2 | 5 | 0.001 |
| GO: 0051091 | Positive regulation of sequence-specific DNA binding transcription factor activity | IL6, SP100, HIPK2, PYCARD, HMGA2, TRIM22, TCF3, ATF2 | 8 | 0.001 |
| GO: 0000122 | Negative regulation of transcription from RNA polymerase II promoter | ATF7IP, SATB1, BACH2, SP100, GABPA, DICER1, YBX3, KLF16, ZEB2, HMGA2, ZNF345, ATF2, SUV39H2, VDR, OLIG3, MLX, PRMT6, HIPK2, ZNF431, TCF3, SMARCA2, SUDS3 | 22 | 0.002 |
| GO: 0006351 | Transcription, DNA-templated | XRCC5, ZNF555, IRX5, CCNT1, YBX3, BBX, TTLL5, ZNF250, ZEB2, ZNF652, ZNF184, VDR, OLIG3, PRMT6, ZNF426, KDM3B, BAZ2A, TCF3, MAP2K6, ATF7IP, SATB1, SP100, ZNF620, ZNF92, KLF16, SCAI, TRIM22, ATMIN, ZNF585B, FAM208A, SUV39H2, ZBTB25, EYA4, ZNF439, MLX, PARP14, HIPK2, ZNF431, ZNF432, SMARCA2, FOXD4L6, SUDS3, ZNF573, ZBTB8A | 44 | 0.002 |
| GO: 0006355 | Regulation of transcription, DNA-templated | ZNF555, IRX5, YBX3, BBX, ZNF250, ZNF652, ATF2, VDR, ZNF184, ZNF426, KDM3B, BAZ2A, INSR, TCF3, MAP2K6, SATB1, ZNF620, ZNF92, SCAI, AFF1, HMGA2, TRIM22, ZNF585B, FAM208A, ZBTB25, EYA4, TULP4, ZNF439, PARP14, CDKN2AIP, MLX, ZNF431, ZNF432, SMARCA2, ZBTB8A, ZNF573 | 36 | 0.003 |
| GO: 0005138 | Interleukin-6 receptor binding | IL6, PYCARD, ADAM17 | 3 | 0.004 |
| GO: 0015031 | Protein transport | SLC7A6OS, RAB9A, RAB3D, KIF17, DUOXA1, RAB39A, VPS52, PKDCC, HOOK3, GOPC, SNX30, SNX20, EXOC6B | 13 | 0.011 |
| GO: 0050892 | Intestinal absorption | F11R, VDR, KCNQ1 | 3 | 0.016 |
| GO: 0042147 | Retrograde transport, endosome to Golgi | SPAG9, RAB9A, STX16, VPS52, VPS26A | 5 | 0.017 |
| GO: 0032259 | Methylation | METTL8, TRMT10B, SETD9, CARNMT1, NNMT | 5 | 0.020 |
| GO: 0032290 | Peripheral nervous system myelin formation | NCMAP, DICER1 | 2 | 0.028 |
| GO: 0005509 | Calcium ion binding | PCDH11Y, PCDH11X, RPH3AL, DAG1, STIM1, MMP17, FSTL4, TTN, IQGAP1, CALU, ITPR2, PLSCR1, CALML4, TPT1, SYTL2, EGF, CALM2, CACNA1B | 18 | 0.029 |
| GO: 0008544 | Epidermis development | SATB1, STS, ELF3, INSR, SCEL | 5 | 0.033 |
| GO: 0003677 | DNA binding | XRCC5, ZNF555, AGFG1, KIAA1958, CCNT1, YBX3, BBX, ZNF250, ZEB2, ZNF345, ZNF652, ZNF184, VDR, OLIG3, HIST1H4C, ZNF426, BAZ2A, TCF3, SATB1, SP100, ZNF620, CHTF8, GABPA, HMGA2, ZBTB25, PLSCR1, ZNF439, RFC2, MLX, HIPK2, RAD18, ZNF432, ZNF573, ZBTB8A | 34 | 0.035 |
| GO: 0046872 | Metal ion binding | ZNF555, MGAT5B, AGFG1, DICER1, ZNF250, ZEB2, ZNF345, ZNF652, ATF2, ZFC3H1, ZNF184, CLEC17A, FGG, HMOX1, ZC3H12B, ZNF426, KDM3B, STS, KCND3, NRXN3, ZNF620, ZNF92, KLF16, RPH3AL, ATMIN, ZNF585B, ZBTB25, EYA4, ZNF439, GNAQ, ADAM17, ZNF431, YME1L1, ZNF432, ADAM12, ZNHIT6, CACNA1D, UGP2, ZBTB8A, ZNF573 | 40 | 0.042 |
| GO: 0070644 | Vitamin D response element binding | VDR, TCF3 | 2 | 0.042 |
| GO: 0005794 | Golgi apparatus | STS, RAB39A, FGFRL1, VPS52, PKDCC, PRKG1, SART1, CALU, HOOK3, PLSCR1, NRAS, COPB1, STX16, GOPC, CNTNAP2, CAND1, B4GALT7, TRAPPC3, SLC30A7 | 19 | 0.044 |
| GO: 0007173 | Epidermal growth factor receptor signaling pathway | NRAS, ADAM17, EGF, IQGAP1 | 4 | 0.045 |