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. 2020 Feb 18;21:169. doi: 10.1186/s12864-020-6579-z

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© The Author(s). 2020

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — Pathway enrichment analysis by tissue pair comparisons. The ratio between the number of DEGs mapped to a pathway and the total number of genes mapped to that pathway are indicated by enrichment factors. a Disk florets of German chamomile vs. Ray florets of German chamomile (MC_DF-VS-MC-RF), b Disk florets of Roman chamomile vs. Ray florets of Roman chamomile (CN_DF-VS-CN_RF), c Ray florets of Roman chamomile vs. Ray florets of German chamomile (CN_RF-VS-MC_RF), d Disk florets of Roman chamomile vs. Disk florets of German chamomile CN_DF-VS-MC_DF. A larger enrichment factor indicates greater intensiveness. X-axis represents KEGG pathways, Y-axis represents enrichment factors. The Q values were calculated using a hypergeometric test with the Bonferroni Correction. The Q value is a corrected p value that ranges from 0 to 1, and lower Q values mean greater intensiveness. “Gene number” refers to the number of DEGs mapped to a given pathway.