Table 2.

Test mean squared error (MSE) for CNNGWP, GBLUP, and BLASSO for each of the three data sets.

Data set	CNNGWP	GBLUP	BLASSO
QTLMAS2010	62.34	88.42	89.22
Pig EBV	0.301	0.305	0.307
Pig phenotype	3.51	3.64	3.61