Antibodies |
Goat anti-GFP |
Abcam |
ab6658, RRID: AB_305631 |
Rabbit anti-HOPX |
Santa Cruz Biotechnology |
sc-30216, RRID: AB_2120833 |
Mouse anti-PTPRZ1 |
Santa Cruz Biotechnology |
sc-33664, RRID: AB_2253176 |
Mouse anti-SOX2 |
Santa Cruz Biotechnology |
sc-365823, RRID: AB_10842165 |
Rabbit anti-PTPRZ1 |
Atlas Antibodies |
HPA015103, RRID: AB_1855946 |
Rabbit anti-PDGFRA |
Cell Signaling |
3174S, RRID: AB_2162345 |
Rabbit anti-GLAST |
Abcam |
ab416, RRID: AB_304334 |
Rabbit anti-OLIG2 |
Millipore |
AB9610, RRID: AB_570666 |
Mouse anti-SATB2 |
Abcam |
ab51502: AB_882445 |
Mouse anti-CD31 |
Agilent |
GA610, RRID: AB_2114471 |
Mouse anti-Ki67 |
Dako |
M724001, RRID: AB_2631211 |
Bacterial and Virus Strains |
CMV-adeno-GFP virus |
Vector Biolabs |
1060 |
Chemicals, Peptides, and Recombinant Proteins |
BDNF, 20ng/mL |
Millipore Sigma |
SRP3014-10 |
3-Benzyl-5-((2-nitrophenoxy)methyl)-dihydrofuran-2(3H)-one (3BDO) (Peng et al., 2014), 60uM |
Millipore Sigma |
SML1687 |
Rock Inhibitor Y-27632 |
Tocris |
1254 |
IWR-1-endo |
Cayman Chemical |
13659 |
SB431542 |
Tocris |
1614 |
Critical Commercial Assays |
10X Chromium v2 |
10X Genomics |
PN-120237 |
Deposited Data |
Single-Cell RNA-sequencing |
PRJNA579593 |
N/A |
Experimental Models: Cell Lines |
DBTRGFL PDX Line |
Brain Tumor Research Center UCSF |
N/A |
Experimental Models: Organisms/Strains |
CD1 Mice |
Jackson Laboratory |
003814 |
Oligonucleotides |
PTPRZ1 qPCR primer F1 |
ATC CTG GCA GCA GGT GAC TCA G |
N/A |
PTPRZ1 qPCR primer R1 |
CCT CAG CTA GAC CAA TAC GAG AC |
N/A |
Software and Algorithms |
Seurat v2 |
Publicly Available |
N/A |