Table 2. Position, CLR statistics, and estimates for strength of selection (α, 2N_es, and s) for populations and sweeps discussed in detail.

Annotated colour pattern genes and CREs that overlap with peaks are given. Positions are given in Hmel2 scaffold coordinates (see S5 and S7 Tables).

Population	Colour pattern region	Position	CLR	α	2Nes	s	Annotated colour pattern gene or CRE
H. m. plesseni	WntA	1829355	1098	6.3	95215	0.035	WntA gene, 1. exona
H. m. xenoclea	WntA	1811430	971	4.54	118013	0.049	WntA exon, 1. exona
H. c. weymeri f. weymeri	cortex	1337975	2411	5.3	115568	0.065	next to UTR4 of cortex geneb
	cortex	1218021	367	20.74	29538	0.017	cortex gene, ventral Ybc
H. m. meriana	optix	801534	1250	9.45	35360	0.023	dennis CREd
H. m. plesseni	optix	643924	2174	6.07	48223	0.035	upstream of optix
		732278	1638	6.21	47109	0.034	band CRE1e
		783431	2371	6.97	41978	0.03	band CRE2e
H. m. xenoclea	optix	727532	1182	9.74	37910	0.022	band CRE1e
H. e. notabilis	WntA	4648024	909	14.09	66925	0.011	Sd regionf
H. e. notabilis	cortex	2497650	1387	15.2	93112	0.015	WAS homologue 1b
		1963287	472	49.76	28438	0.005	Cr1f
H. e. demophoon	cortex	2277009	1050	13.99	103964	0.016	Cr2f
H. e. notabilis	optix	1294528	4690	3.03	370210	0.059	optix gene and CREsf

^aMazo-Vargas and colleagues [83]

^bNadeau and colleagues [30]

^cEnciso-Romero and colleagues [39]

^dWallbank and colleagues [36]

^eHanly [37]

^fVan Belleghem and colleagues [38]

Abbreviations: CLR, composite likelihood ratio; CRE, cis-regulatory element