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. 2020 Jan 8;7(1):190669. doi: 10.1098/rsos.190669

Table 2.

Selection signals in the mitogenomes of Gammarus lacustris (GL) and Gammarus pisinnus (GP) inferred using BUSTED, aBSREL and RELAX algorithms. 13PCG is the dataset comprising all 13 concatenated (non-partitioned) protein-coding genes. Sites column shows the number of sites in the alignment. K column: a statistically significant K > 1 indicates that selection strength has been intensified, and K < 1 that selection strength has been relaxed. LR is likelihood ratio, p is p-value and D indicates the direction of selection pressure change: intensified (I) or relaxed (R), where * highlights a statistically significant (p < 0.05) result.

data sites Gammarus lacustris (GL)
Gammarus pisinnus (GP)
BUSTED aBSREL RELAX
BUSTED aBSREL RELAX
p-value p-value K LR p-value D p-value p-value K LR p-value D
13PCG 3743 0.024* 0.005* 1.21 11.54 0.001 I* 0.001* 0.010* 0.63 56.39 0.000 R*
atp6 223 1.000 1.000 14.80 7.48 0.006 I* 0.487 1.000 0.68 1.51 0.219 R
atp8 58 1.000 1.000 1.02 0.02 0.897 I 0.000* 0.004* 0.13 1.14 0.286 R
cox1 527 1.000 1.000 1.87 12.31 0.000 I* 1.000 1.000 1.00 −0.38 1.000 I
cox2 231 1.000 1.000 1.60 2.76 0.097 I 1.000 1.000 1.00 0.00 1.000 R
cox3 262 0.345 0.087 2.24 8.05 0.005 I* 0.327 0.144 0.45 −6.96 1.000 R
cytb 380 1.000 0.168 2.37 6.63 0.010 I* 1.000 1.000 0.46 7.91 0.005 R*
nad1 313 1.000 1.000 1.18 0.90 0.343 I 0.749 1.000 0.77 3.24 0.072 R
nad2 330 0.718 1.000 1.01 0.37 0.543 I 0.562 0.431 0.84 0.42 0.516 R
nad3 119 1.000 1.000 7.91 6.98 0.008 I* 0.049* 0.454 0.64 2.28 0.131 R
nad4 447 1.000 1.000 1.04 0.40 0.530 I 1.000 1.000 0.58 7.75 0.005 R*
nad4 L 98 1.000 1.000 0.36 4.98 0.026 R* 1.000 1.000 2.05 2.61 0.106 I
nad5 579 0.741 0.385 1.38 4.23 0.040 I* 0.460 0.500 2.15 −45.82 1.000 I
nad6 176 0.766 0.500 0.95 −0.09 1.000 R 1.000 1.000 0.49 4.41 0.036 R*