Skip to main content
. 2020 Feb 21;6(8):eaay5483. doi: 10.1126/sciadv.aay5483

Table 2. Effect on singleton site pattern frequencies of gene flow (mδ) from superarchaics into neandersovans.

Column 2 shows expected frequencies of singleton site patterns in a model in which mδ = 0, and all other parameters are as fitted under model αβγδ. In column 3, all parameters including mδ are as fitted under this model. Column 4 is obtained by subtracting column 2 from column 3. Expected site pattern frequencies were estimated using legosim with 107 iterations.

Site pattern Frequency
mδ = 0 mδ = 0.034 Difference
x 0.15583 0.15174 −0.00409
y 0.15176 0.14778 −0.00398
v 0.04974 0.04942 −0.00032
a 0.03795 0.03798 0.00003
d 0.16051 0.16444 0.00393