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. 2020 Feb 20;9(8):e00017-20. doi: 10.1128/MRA.00017-20

TABLE 1.

Isolation medium, accession numbers, assembly metrics, and annotated features of the isolated and sequenced strains

Bacterial species and strain Isolation mediuma Estimated insert size (bp) Total no. of generated reads No. of trimmed reads Trimmed reads mapped against respective contigs (%) Genome size (bp) No. of contigs (avg coverage [×]) N50 (bp) Total no. of genes G+C content (%) GenBank accession no. for:
WGS sequence SRA 16S rRNA
Adlercreutzia equolifaciens ResAG-91 BHI 273.686 985,811 977,851 99.25 2,798,076 74 (94.93) 107,842 2,394 63.31 WPOO00000000 SRX7372034 MH553318
Eggerthella lenta MRI-F 36 DSMZ medium 339 246.491 1,435,469 1,423,441 99.51 3,299,594 52 (105.81) 129,153 2,869 64.18 WPOJ00000000 SRX7372042 MH741250
Eggerthella lenta MRI-F 37 DSMZ medium 339 261.130 1,154,148 1,142,818 99.30 3,296,275 54 (89.90) 98,732 2,870 64.17 WPOI00000000 SRX7372043 MH741251
Eggerthella lenta MRI-F 40 DSMZ medium 209 266.125 1,404,393 1,394,064 99.57 3,300,040 51 (111.94) 141,895 2,871 64.17 WPOH00000000 SRX7372044 MH741252
Eggerthella lenta ResAG-49 BHI 272.720 1,418,094 1,407,300 99.55 3,401,533 75 (112.32) 104,054 2,974 64.02 WPON00000000 SRX7372035 MN326807
Eggerthella lenta ResAG-88 BHI 250.974 1,142,425 1,132,812 99.49 3,472,506 81 (81.46) 120,561 3,005 64.02 WPOM00000000 SRX7372039 MH553319
Eggerthella lenta ResAG-121 BHI 244.812 939,424 934,970 99.29 3,485,223 147 (65.21) 68,051 3,049 64.01 WPOL00000000 SRX7372040 MN326808
Eggerthella lenta ResAG-145 BHI 246.178 1,070,253 1,061,803 99.36 3,501,112 154 (74.18) 70,468 3,081 64.01 WPOK00000000 SRX7372041 MH553320
Gordonibacter urolithinfaciens ResAG-5 BHI 273.836 1,200,885 1,191,875 99.20 3,654,461 148 (88.60) 63,214 3,271 65.84 WPOG00000000 SRX7372045 MN326811
Gordonibacter urolithinfaciens ResAG-26 BHI 292.846 1,308,806 1,305,933 99.59 3,609,950 92 (105.51) 92,475 3,205 65.91 WPOF00000000 SRX7372046 MN326812
Gordonibacter urolithinfaciens ResAG-43 BHI 307.341 1,022,809 1,020,471 99.59 3,663,595 82 (85.26) 86,434 3,253 65.88 WPOE00000000 SRX7372036 MH553321
Gordonibacter urolithinfaciens ResAG-50 BHI 282.045 960,936 957,184 99.31 3,610,667 117 (74.25) 64,270 3,212 65.92 WPOD00000000 SRX7372037 MN326813
Gordonibacter urolithinfaciens ResAG-59 BHI 284.838 1,256,789 1,253,103 99.62 3,664,069 77 (97.04) 98,836 3,250 65.88 WPOC00000000 SRX7372038 MN326814
a

DSMZ medium 339, Wilkins-Chalgren anaerobe broth; DSMZ medium 209 (Eubacterium lentum medium), chopped meat medium supplemented with 0.5% arginine.