TABLE 1.
Bacterial species and strain | Isolation mediuma | Estimated insert size (bp) | Total no. of generated reads | No. of trimmed reads | Trimmed reads mapped against respective contigs (%) | Genome size (bp) | No. of contigs (avg coverage [×]) | N50 (bp) | Total no. of genes | G+C content (%) | GenBank accession no. for: |
||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
WGS sequence | SRA | 16S rRNA | |||||||||||
Adlercreutzia equolifaciens ResAG-91 | BHI | 273.686 | 985,811 | 977,851 | 99.25 | 2,798,076 | 74 (94.93) | 107,842 | 2,394 | 63.31 | WPOO00000000 | SRX7372034 | MH553318 |
Eggerthella lenta MRI-F 36 | DSMZ medium 339 | 246.491 | 1,435,469 | 1,423,441 | 99.51 | 3,299,594 | 52 (105.81) | 129,153 | 2,869 | 64.18 | WPOJ00000000 | SRX7372042 | MH741250 |
Eggerthella lenta MRI-F 37 | DSMZ medium 339 | 261.130 | 1,154,148 | 1,142,818 | 99.30 | 3,296,275 | 54 (89.90) | 98,732 | 2,870 | 64.17 | WPOI00000000 | SRX7372043 | MH741251 |
Eggerthella lenta MRI-F 40 | DSMZ medium 209 | 266.125 | 1,404,393 | 1,394,064 | 99.57 | 3,300,040 | 51 (111.94) | 141,895 | 2,871 | 64.17 | WPOH00000000 | SRX7372044 | MH741252 |
Eggerthella lenta ResAG-49 | BHI | 272.720 | 1,418,094 | 1,407,300 | 99.55 | 3,401,533 | 75 (112.32) | 104,054 | 2,974 | 64.02 | WPON00000000 | SRX7372035 | MN326807 |
Eggerthella lenta ResAG-88 | BHI | 250.974 | 1,142,425 | 1,132,812 | 99.49 | 3,472,506 | 81 (81.46) | 120,561 | 3,005 | 64.02 | WPOM00000000 | SRX7372039 | MH553319 |
Eggerthella lenta ResAG-121 | BHI | 244.812 | 939,424 | 934,970 | 99.29 | 3,485,223 | 147 (65.21) | 68,051 | 3,049 | 64.01 | WPOL00000000 | SRX7372040 | MN326808 |
Eggerthella lenta ResAG-145 | BHI | 246.178 | 1,070,253 | 1,061,803 | 99.36 | 3,501,112 | 154 (74.18) | 70,468 | 3,081 | 64.01 | WPOK00000000 | SRX7372041 | MH553320 |
Gordonibacter urolithinfaciens ResAG-5 | BHI | 273.836 | 1,200,885 | 1,191,875 | 99.20 | 3,654,461 | 148 (88.60) | 63,214 | 3,271 | 65.84 | WPOG00000000 | SRX7372045 | MN326811 |
Gordonibacter urolithinfaciens ResAG-26 | BHI | 292.846 | 1,308,806 | 1,305,933 | 99.59 | 3,609,950 | 92 (105.51) | 92,475 | 3,205 | 65.91 | WPOF00000000 | SRX7372046 | MN326812 |
Gordonibacter urolithinfaciens ResAG-43 | BHI | 307.341 | 1,022,809 | 1,020,471 | 99.59 | 3,663,595 | 82 (85.26) | 86,434 | 3,253 | 65.88 | WPOE00000000 | SRX7372036 | MH553321 |
Gordonibacter urolithinfaciens ResAG-50 | BHI | 282.045 | 960,936 | 957,184 | 99.31 | 3,610,667 | 117 (74.25) | 64,270 | 3,212 | 65.92 | WPOD00000000 | SRX7372037 | MN326813 |
Gordonibacter urolithinfaciens ResAG-59 | BHI | 284.838 | 1,256,789 | 1,253,103 | 99.62 | 3,664,069 | 77 (97.04) | 98,836 | 3,250 | 65.88 | WPOC00000000 | SRX7372038 | MN326814 |
DSMZ medium 339, Wilkins-Chalgren anaerobe broth; DSMZ medium 209 (Eubacterium lentum medium), chopped meat medium supplemented with 0.5% arginine.