Table 5.
Illumina sequence data summary.
| Sample | Raw Reads | Clean reads | Clean bases | Error(%) | Q20(%) | Q30(%) | GC(%) |
|---|---|---|---|---|---|---|---|
| CK_1 | 47969924 | 46727642 | 7.01G | 0.02 | 97.18 | 92.74 | 48.71 |
| CK_2 | 48210238 | 46983082 | 7.05G | 0.02 | 97.26 | 92.88 | 47.39 |
| CK_3 | 47621326 | 46338836 | 6.95G | 0.02 | 97.22 | 92.86 | 48.81 |
| C10_1 | 51912874 | 50507622 | 7.58G | 0.02 | 97.3 | 93.04 | 48.05 |
| C10_2 | 54575068 | 53123724 | 7.97G | 0.02 | 97.24 | 92.88 | 47.86 |
| C10_3 | 43434834 | 42308338 | 6.35G | 0.02 | 97.16 | 92.72 | 47.98 |
| C25_1 | 53046134 | 51653988 | 7.75G | 0.02 | 97.21 | 92.85 | 47.72 |
| C25_2 | 50670778 | 49335294 | 7.4G | 0.02 | 97.2 | 92.83 | 47.43 |
| C25_3 | 48802216 | 47529824 | 7.13G | 0.02 | 97.22 | 92.87 | 48.21 |
| C5_1 | 46545984 | 45367348 | 6.81G | 0.02 | 97.36 | 93.08 | 48.36 |
| C5_2 | 48159566 | 46831892 | 7.02G | 0.02 | 97.22 | 92.85 | 48.22 |
| C5_3 | 43800040 | 42646128 | 6.4G | 0.02 | 97.31 | 93.03 | 48.56 |