Table 2.
Eimeria protein amino acid sequence comparison
Spot IDa | Accession number | Amino acid sequence identity (%)b | SecP/SP/TM predictionc | ||
---|---|---|---|---|---|
E. acervulina | E. tenella | E. necatrixd | |||
1 | XP_013248731.1 | 100 | 58.72 | 44.88 | 0.053/N/N |
2 | XP_013246990.1 | 100 | 51.65 | 52.07 | 0.656*/N/N |
3 | XP_013250980.1 | 100 | 38.95 | 41.18 | 0.068/N/N |
4 | XP_013248237.1 | 100 | 48.54 | 48.71 | 0.371/N/N |
5 | XP_013252320.1 | 100 | 75.00 | – | 0.533/N/N |
6 | XP_013250573.1 | 100 | 75.19 | 75.19 | 0.843*/N/N |
7 | XP_013249139.1 | 100 | 95.14 | 94.33 | 0.462/N/N |
8 | XP_013249709.1 | 100 | 61.07 | 62.09 | 0.798*/N/N |
9 | XP_013248843.1 | 100 | 89.58 | 85.42 | 0.435/N/N |
10 | XP_013248247.1 | 100 | 73.67 | 73.35 | 0.42/N/N |
11 | XP_013248554.1 | 100 | 50.00 | 51.80 | 0.662*/N/N |
12 | XP_013251305.1 | 100 | 94.10 | 92.63 | 0.635*/N/N |
13 | XP_013251976.1 | 100 | 66.54 | 66.73 | 0.404/N/N |
14 | XP_013247421.1 | 100 | 58.44 | 60.60 | 0.245/N/N |
15 | XP_013251081.1 | 100 | 80.95 | 81.28 | 0.172/N/N |
16 | XP_013248652.1 | 100 | 84.56 | 89.52 | 0.799*/N/N |
17 | XP_013253345.1 | 100 | 96.00 | 96.00 | 0.283/N/N |
18 | XP_013248150.1 | 100 | 61.90 | 62.67 | 0.423/N/N |
19 | XP_013250395.1 | 100 | 61.68 | 47.85 | 0.298/N/N |
20 | XP_013251340.1 | 100 | 58.02 | 59.36 | 0.376/N/N |
21 | XP_013252670.1 | 100 | 67.26 | 67.51 | 0.454/N/N |
a2-dimensional gel electrophoresis (2-DE) gel spot number
bAll protein sequences within the same row are compared to that of E. acervulina using CLUSTAL Omega (https://www.ebi.ac.uk/Tools/msa/clustalo/)
cNon-classical secretory property (SecP) and presence of a signal peptide (SP) and transmembrane domains (TM) were analyzed by the SecretomeP 2.0a Server (http://www.cbs.dtu.dk/services/SecretomeP/), SignalP-5.0 Server (http://www.cbs.dtu.dk/services/SignalP/) and TMHMM Server v. 2.0 (http://www.cbs.dtu.dk/services/TMHMM/), respectively
dEimeria necatrix ortholog for XP_013252320.1 was not found
Abbreviations: *, a SecP score exceeds the threshold (0.6), indicative of a secretory potential through the non-classical pathway for proteins with no signal peptides; N, not present