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. 2020 Feb 21;13:93. doi: 10.1186/s13071-020-3965-y

Table 2.

Eimeria protein amino acid sequence comparison

Spot IDa Accession number Amino acid sequence identity (%)b SecP/SP/TM predictionc
E. acervulina E. tenella E. necatrixd
1 XP_013248731.1 100 58.72 44.88 0.053/N/N
2 XP_013246990.1 100 51.65 52.07 0.656*/N/N
3 XP_013250980.1 100 38.95 41.18 0.068/N/N
4 XP_013248237.1 100 48.54 48.71 0.371/N/N
5 XP_013252320.1 100 75.00 0.533/N/N
6 XP_013250573.1 100 75.19 75.19 0.843*/N/N
7 XP_013249139.1 100 95.14 94.33 0.462/N/N
8 XP_013249709.1 100 61.07 62.09 0.798*/N/N
9 XP_013248843.1 100 89.58 85.42 0.435/N/N
10 XP_013248247.1 100 73.67 73.35 0.42/N/N
11 XP_013248554.1 100 50.00 51.80 0.662*/N/N
12 XP_013251305.1 100 94.10 92.63 0.635*/N/N
13 XP_013251976.1 100 66.54 66.73 0.404/N/N
14 XP_013247421.1 100 58.44 60.60 0.245/N/N
15 XP_013251081.1 100 80.95 81.28 0.172/N/N
16 XP_013248652.1 100 84.56 89.52 0.799*/N/N
17 XP_013253345.1 100 96.00 96.00 0.283/N/N
18 XP_013248150.1 100 61.90 62.67 0.423/N/N
19 XP_013250395.1 100 61.68 47.85 0.298/N/N
20 XP_013251340.1 100 58.02 59.36 0.376/N/N
21 XP_013252670.1 100 67.26 67.51 0.454/N/N

a2-dimensional gel electrophoresis (2-DE) gel spot number

bAll protein sequences within the same row are compared to that of E. acervulina using CLUSTAL Omega (https://www.ebi.ac.uk/Tools/msa/clustalo/)

cNon-classical secretory property (SecP) and presence of a signal peptide (SP) and transmembrane domains (TM) were analyzed by the SecretomeP 2.0a Server (http://www.cbs.dtu.dk/services/SecretomeP/), SignalP-5.0 Server (http://www.cbs.dtu.dk/services/SignalP/) and TMHMM Server v. 2.0 (http://www.cbs.dtu.dk/services/TMHMM/), respectively

dEimeria necatrix ortholog for XP_013252320.1 was not found

Abbreviations: *, a SecP score exceeds the threshold (0.6), indicative of a secretory potential through the non-classical pathway for proteins with no signal peptides; N, not present